Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1565 ATGCTGAATTGCTCAATGGAATCGGTTGGTGATGGAGTTAGTTCTTTCCCAAAGACTCATAATTCTGCTTCTGTGATGGGCTATAACCTTTCTTCCATCTCTGGGACTTCTCGCCCCACTCGGCTTCCACCTCCAAAACAATCTAGAAATGACGGGGCTTCTTCTGCATCTTATGCAACTGTTCCTGACCATGGGATGAAGACTGTCCTACATGCAGTGGACTCTGTAATCAATGAAAAGCATTCCCACAAAACAGCACAAGATCATATGCATCTCGAAGAACTACATACTTCATCAAAACAATTATATAAATCAAACAAAGATCAATTGGTTGTGGGCCCAAATGATGTTCTTGATAAGATGGTGAAAAATTCTTCTCAAAAGCAGGTTTCAGCAGTGGAAACCAAATCTTGCATCAAGCATCCTGTTGATGTTTCTGAGAATTGTAATTCAAGTGGATTGATAGGTCCTGAAAATTTTGTTCCAGGCCCATGTAAAGGAGGTGTTGTAGAACCAAACAGCCAATTAACGGCTCAATCAGCAATTAGCTTTTGCGCTAGTCCTCAAAACAGTCTATACTCTGCAACTCAGTACACAGAAGCAAAACAAAGTTTCACCAACACGGAGGTTAGTGAATGTGCAAGCAGTGTAGAGAAGTCTGGTGAAAGTGCTGAAATTAGCAACTCCTGTGATTTTGCTGAGAGCAGGAAGACTAGTATCTACAGAGGTAGCACTGGCAGTGATGTTAGTGATGAAAGCAGCTCCAGCAGTTTTAGTAGCACTCTTTACAAGCCTCACAAGGCAAATGATACAAGATGGGAAGCAATTCAAGCTGTGCGATCTCGTGATGGGGTGTTGGGTTTGAACCACTTCAGGCTGTTGAAGAAATTGGGATGTGGAGATATAGGCACTGTTTATCTGTCAGAGTTGAGTTGCACTAGAAGTTACTTTGCCATGAAAGTTATGGATAAAGGAGCTCTAGCGAGCCGGAAGAAGCTTCTGAGGGCTCAAACAGAGAGAGAGATATTGCAATCTTTGGATCATCCATTTCTGCCTACTTTGTACACACACTTTGAGACAGAGAAGTTCTCTTGCTTGGTGATGGAGTTCTGCCCTGGGGGTGATTTGCACGCACTCAGACAGAGACAACCAGGGAAATATTTCTCAGAGCATGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTATTTGCACATGCTTGGGATCATTTACAGGGACCTGAAACCAGAGAATGTTCTGGTGAGGGAAGATGGGCATATAATGCTTTCAGACTTTGACCTCTCCCTAAGGTGTGCTGTCTGCCCGACGTTGGTCAAATTCTCAAACTCAAGCTTGGAATCCAAGAACTCAGGATATTGTGTTCAGCCTGCTTGCATTGAGCCAACCTGTGTCATCCAGCCATCTTGCATCCAACCCACATGTTTTGCTCCACGCTTCTTGACAAGGGCCAAGAAAGAGAAAAAGGCAAAACCAAAGAATGACATATATCATCAAGTGAGCCCTCTCCCAGAGCTCATAGCTGAACCCACAACCGCTCGATCAATGTCCTTTGTGGGTACTCACGAGTACTTGGCACCTGAAATCATTAAAGGTGAAGGGCATGGCAGTGCTGTTGACTGGTGGACATTTGGGATCTTTCTCTATGAGCTCTTGTTTGGTAAAACTCCTTTTAAGGGAGCTGGAAACCGGGCTACTCTCTTCAATGTGGTTGGGCAGCCGCTTAGATTTCCTGAGTCACCTGCAGTAAGCTTTGCTGCAAGGGACTTGATAAGAGGTTTGCTTGTGAAAGAACCACAGCATCGCCTTGCATATAGGCGTGGAGCAACAGAAGTTAAGCAGCATCCGTTCTTTCAGAGTGTGAATTGGGCACTCATTCGATGTACCAATCCGCCAGACATGCCAAAACCATTCATGATAGACTTCTCTGCAAGAAGTGACACAACAAAAGCACCCACAGCCGGAAAGGTCCCAGGTGTTGATGTGAAGCCTTCTGGTAATTATTTAGAGATCGATTTCTTTTGA 2052 0.4449 MLNCSMESVGDGVSSFPKTHNSASVMGYNLSSISGTSRPTRLPPPKQSRNDGASSASYATVPDHGMKTVLHAVDSVINEKHSHKTAQDHMHLEELHTSSKQLYKSNKDQLVVGPNDVLDKMVKNSSQKQVSAVETKSCIKHPVDVSENCNSSGLIGPENFVPGPCKGGVVEPNSQLTAQSAISFCASPQNSLYSATQYTEAKQSFTNTEVSECASSVEKSGESAEISNSCDFAESRKTSIYRGSTGSDVSDESSSSSFSSTLYKPHKANDTRWEAIQAVRSRDGVLGLNHFRLLKKLGCGDIGTVYLSELSCTRSYFAMKVMDKGALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVCPTLVKFSNSSLESKNSGYCVQPACIEPTCVIQPSCIQPTCFAPRFLTRAKKEKKAKPKNDIYHQVSPLPELIAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPESPAVSFAARDLIRGLLVKEPQHRLAYRRGATEVKQHPFFQSVNWALIRCTNPPDMPKPFMIDFSARSDTTKAPTAGKVPGVDVKPSGNYLEIDFF* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1565 683 SUPERFAMILY Protein kinase-like (PK-like) 265 658 IPR011009 -
Vvi14g1565 683 MobiDBLite consensus disorder prediction 243 263 - -
Vvi14g1565 683 SMART serkin_6 291 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1565 683 Gene3D Transferase(Phosphotransferase) domain 1 375 441 - -
Vvi14g1565 683 ProSiteProfiles Protein kinase domain profile. 291 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1565 683 MobiDBLite consensus disorder prediction 30 57 - -
Vvi14g1565 683 FunFam Serine/threonine-protein kinase D6PK-like 289 374 - -
Vvi14g1565 683 FunFam serine/threonine-protein kinase D6PK-like 375 442 - -
Vvi14g1565 683 CDD STKc_phototropin_like 290 646 - -
Vvi14g1565 683 PANTHER FLIPPASE KINASE 1-RELATED 94 648 - -
Vvi14g1565 683 Gene3D Transferase(Phosphotransferase) domain 1 523 650 - -
Vvi14g1565 683 MobiDBLite consensus disorder prediction 30 63 - -
Vvi14g1565 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Vvi14g1565 683 Gene3D Phosphorylase Kinase; domain 1 289 374 - -
Vvi14g1565 683 FunFam serine/threonine-protein kinase D6PK-like 522 645 - -
Vvi14g1565 683 Pfam Protein kinase domain 524 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1565 683 Pfam Protein kinase domain 292 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1565 Vvi-Chr14 26961797 26965627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1565 198 683 AGC Kinase Gene Family AT5G47750 73.887 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vvi14g1565 Pkinase 2.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1565 K08286 - vvi:100268156 1347.41