Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1536 ATGGGATGGCCCCTTCTGGGGGAGACTCTTGCCTACCTGAAGCCACATAAATCCGACTCTATAGGGATCTTCTTGCAGGAACATTGCTCTAGGTATGGGAAAGTCTTCAAATCACATCTATTTGGTCACAGAACCATAGTTTCCTGCGACCATGAGCTCAACATGTTCATTCTTCAGAATGAAGAGAAGCTATTCCAGTCCAGCTATCCCCAGGCCCTTCATGGCATCTTAGGAAGAAATTCTTTGATTCTTGTGTCCGGGGACGTTCACAAAAAGCTAAGAAGTCTTGCTCTAGGCATGATTGGTGGTACTAAGTCGACAGTCAACTTCCTTCCTTCCATAGAAAGACTGTCAATATCAATGATGGAGTTATGGAAAGGATGCAAAGAAGTTGTCTTCTGCAAAGAAGCTAAAAGGTTCACGTTCAATCTCATGATGAAGCAAAGTCTAAGTATTGGACCAGATGAGGCAGTGACCGCTCAGATATTGGAAGACTTCCATACCTTCATGAAGGGCTTTGTGTCTCTCCCAATATATATCCCAGGAACCTCCTATCATAAGGCTGTGAAGGCTAGAGAAAGGATCACCTCTACTGTCAAAGGGATCATAGAAGGAAGGAGGAAAGAGAACAGGCTTCAAAATGGAGACTTTCTAGATGTGATTTTATCAAAGGAGAACTTAACTGATGAAGAGAGAGAACACCTAGCCATAAGGAAAAACAAAAACGATGGAGAGCTCTTGAGTTGGGAAGATTACAAGCAGATGAACTTCACCCTCAATGTCATATATGAAGGCCTGAGATGTGGGAATGTGGTCAAGTTTGTGCACAGAAAATCTCTTGAAGATATCAGATTCAAAGAGTATCTCATTCCTGCAGGATGGAAGGTTCTCCCTGTCTTTACTGCAGTGCACCATGATCCCTGTCTTCATGAAAATCCTTGGGATTTCAACCCTTGGAGATGGGACGATCAAGCAACCAACAAAAAGGTCAGCTTCTTTGGCGGAGGACAGCGGCTGTGTCCAGGGGCAGACCTAGCCAAATTGGAAACCGCTTTCTTCCTTCACCATCTTGTCCTCAACTATAGGTGGAAAATAAAAGGAGATAATTTCCCTCTTGCTTACCCTTATGTGGAGTTCCACAAAGAATTGGCGATTGAGATAGAGCCAATACACAAGACATTGGAACAGAAATGTTAG 1197 0.4353 MGWPLLGETLAYLKPHKSDSIGIFLQEHCSRYGKVFKSHLFGHRTIVSCDHELNMFILQNEEKLFQSSYPQALHGILGRNSLILVSGDVHKKLRSLALGMIGGTKSTVNFLPSIERLSISMMELWKGCKEVVFCKEAKRFTFNLMMKQSLSIGPDEAVTAQILEDFHTFMKGFVSLPIYIPGTSYHKAVKARERITSTVKGIIEGRRKENRLQNGDFLDVILSKENLTDEEREHLAIRKNKNDGELLSWEDYKQMNFTLNVIYEGLRCGNVVKFVHRKSLEDIRFKEYLIPAGWKVLPVFTAVHHDPCLHENPWDFNPWRWDDQATNKKVSFFGGGQRLCPGADLAKLETAFFLHHLVLNYRWKIKGDNFPLAYPYVEFHKELAIEIEPIHKTLEQKC* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1536 398 Gene3D Cytochrome P450 237 376 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1536 398 FunFam Cytochrome P450 family 87 subfamily A polypeptide 2 237 376 - -
Vvi14g1536 398 Pfam Cytochrome P450 3 231 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1536 398 Pfam Cytochrome P450 242 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1536 398 FunFam Uncharacterized protein 1 236 - -
Vvi14g1536 398 SUPERFAMILY Cytochrome P450 2 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1536 398 PRINTS E-class P450 group I signature 330 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1536 398 PRINTS E-class P450 group I signature 299 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1536 398 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1536 398 PRINTS E-class P450 group I signature 340 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1536 398 PANTHER CYTOCHROME P450 26 1 231 - -
Vvi14g1536 398 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 333 342 IPR017972 GO:0005506|GO:0016705
Vvi14g1536 398 CDD CYP90-like 28 389 - -
Vvi14g1536 398 Gene3D Cytochrome P450 1 236 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1536 Vvi-Chr14 26743587 26745706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1536 1 285 Cytochrome P450 AT5G14400 48.476 4.49e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1536 K12639 - vvi:100245690 806.979