Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1514 ATGGCTTCTTCTCCCTTGATGGGTTCCACCACAGTGCTTGTGCTTTTACTCACCATCTTCTCTTCTCTCCAACGCTCCACCGTCTCCTCCTTTGAGTTCCAAGCGGGGGAGGTCAAGGGGTGGGTCGTCCCTCATGCAAACGACAGCAAACTCTACAATGACTGGGCCTCTGAGAACAGGTTCAAGGTCGGCGACTCCATCCGCTTTAGGTACAAGAAAGATTCAGTGATGGTGGTGAGTGAGGCAGACTACAAGAAATGCAATTCCACGCACCCCATCTTCTTCTCCAACACTGGCAACACAGTCTACCACTTGGACCACTCTGGATCTTACTACTTCATCAGTGGGGTGGCTGAACACTGCCAGAGAGGACAGAGGATGATCGTAAAAGTGATGGCATCAGAGGACCCATCTAGTAGGGGTGGTGGCACTCCTCCTTCCAGTGCTCCAACTCTCTCACTTGGACCCTCTAAACTAGTGTTTTTCCAGTTTCTTTTATCATCTGTGGCTGCTTATCTCTTCTAG 525 0.5048 MASSPLMGSTTVLVLLLTIFSSLQRSTVSSFEFQAGEVKGWVVPHANDSKLYNDWASENRFKVGDSIRFRYKKDSVMVVSEADYKKCNSTHPIFFSNTGNTVYHLDHSGSYYFISGVAEHCQRGQRMIVKVMASEDPSSRGGGTPPSSAPTLSLGPSKLVFFQFLLSSVAAYLF* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1514 174 Gene3D - 30 136 IPR008972 -
Vvi14g1514 174 Pfam Plastocyanin-like domain 49 125 IPR003245 GO:0009055
Vvi14g1514 174 ProSiteProfiles Phytocyanin domain profile. 31 133 IPR003245 GO:0009055
Vvi14g1514 174 PANTHER BLUE COPPER PROTEIN 31 137 IPR039391 GO:0009055
Vvi14g1514 174 CDD OsENODL1_like 31 132 IPR041846 -
Vvi14g1514 174 SUPERFAMILY Cupredoxins 31 132 IPR008972 -
Vvi14g1514 174 FunFam Early nodulin-like protein 1 30 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1514 Vvi-Chr14 26436242 26436852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1514 14 135 Phytocyanin Superfamily AT1G48940 54.839 3.23e-46 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1514 - - vvi:100252643 325.479