Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1496 ATGGATGAAGTTGCTGCCAAGGCTGCTCTTGAAGCTGTGAAACAAAAGTTTGGCCATGAAATCCATGTATTTGAAACATCAACAACTTCTCAAACACCAGATGAAGCATCCCATAGTGAGGAGACAGATGACTTCTATGAGTTCACTGCAGAAGATTATTATCGAATTTTGGCCACCAAAAAGGAAGATAAATTCTTGAAGACACGAAAAATCCGAGAAGCAGAAGAGGCTGCTCGCAAGTCGAGAATAACAAAAGCTGTCATTCGGGTGAGATTCCCTGATAATCACACTTTAGAGGCCACATTTCATCCATCGGAGACACTTCAGAGCTTGGTTGATCTCCTCATGAAAGTGATTGCTCAACCAGAACTACCATTCTACATATATACTGCTCCCCCTAAGAAGCAAATAAAAGATATGTCACAGGATTTTTACTCTGCTGGGTTTGTTCCTGGTGCAATCATCTATTTTTCATATGATCAACCAAAGGGCAATGATGGTGCAGCTGGAAATTCGGGTGCCTGCCTTCGAGAAGAAATCATGTCTTTGAAAGGCTTACATCTTGTCACTGAGCTGGTAGAACCCGTCCAACCTGCAATTGAACCTGAAGCTGAAAAAGTGGCTCCTCCCCCTGTTGCCCAAGAGCCCAAGCCTGCTCAGAAAAAACCTGTTAAGCCAAAGTGGCTGAAAATGTGA 696 0.4325 MDEVAAKAALEAVKQKFGHEIHVFETSTTSQTPDEASHSEETDDFYEFTAEDYYRILATKKEDKFLKTRKIREAEEAARKSRITKAVIRVRFPDNHTLEATFHPSETLQSLVDLLMKVIAQPELPFYIYTAPPKKQIKDMSQDFYSAGFVPGAIIYFSYDQPKGNDGAAGNSGACLREEIMSLKGLHLVTELVEPVQPAIEPEAEKVAPPPVAQEPKPAQKKPVKPKWLKM* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1496 231 Pfam UBX domain 84 142 IPR001012 GO:0005515
Vvi14g1496 231 MobiDBLite consensus disorder prediction 201 231 - -
Vvi14g1496 231 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 2 231 IPR044232 GO:0032984|GO:0051117
Vvi14g1496 231 Gene3D - 82 158 - -
Vvi14g1496 231 CDD UBX2_UBXN9 86 159 - -
Vvi14g1496 231 ProSiteProfiles UBX domain profile. 81 157 IPR001012 GO:0005515
Vvi14g1496 231 SUPERFAMILY Ubiquitin-like 60 157 IPR029071 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1496 15 106 C2H2 Transcription Factor Family AT2G01650 34.375 3.60e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1496 K15627 - vvi:100249155 405.986