Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1478 ATGGCTGGAGGAAGGGCAATCCACCAGTTACTGAGGATGAAACTTCGATCACAATCCACTGCCTCTCCAGCTTTGTCATCCCTTCTTGCAAAGAAAGATCAAGAAGGAGTTGGATCAGCTGGTTCAAAGTCCCTTAGAGCACTTGCACTCCTTGGGGCAGGTGTTTCAGGGCTTTTGAGTTTTGCAACAATAGCATCTGCTGATGAGGCTGAGCATGGATTAGAATGTGCAAACTATCCCTGGCCTCACTCAGGCATTCTCAGTTCATATGACCATGCTTCGATTCGTCGTGGTCACCAGGTTTACCAACAAGTCTGTGCATCCTGCCATTCTATGTCACTAATTTCATATCGTGATTTAGTGGGTGTGGCATATACAGAAGAGGAGACAAAGGCTATGGCTGCTGAGATTGAGGTGGCTGATGGGCCTAATGACGAGGGTGAGATGTTTACACGTCCTGGTAAACTCAGTGATCGTTTTCCTCAGCCATATGCAAATGAACAAGCTGCTCGGTTTGCTAATGGAGGAGCTTATCCTCCAGATCTAAGCCTTATCACCAAAGCTCGCCACAATGGTCAAAACTATGTATTTGCACTGCTAACTGGTTACCGTGATCCACCTGCTGGCATTTCGATCCGAGAAGGGTTGCACTACAATCCTTACTTCCCTGGGGGTGCAATTGCTATGCCTAAAATGCTCATTGATGGTGCACTTGAGTATGAAGATGGTACGCCTGCAACAGAGGCTCAGATGGGGAAAGATGTTGTATCATTTTTGACATGGGCAGCGGAACCAGAGATGGAAGAAAGGAAACTGATGGGGTTCAAATGGATATTTTTACTTTCACTGGCACTACTTCAAGCTGCTTATTTCAGGCGATTGAGGTGGTCTGTCTACAAGTCTCGTAAGCTGATTGTTGACGTTGTCAACTAA 933 0.463 MAGGRAIHQLLRMKLRSQSTASPALSSLLAKKDQEGVGSAGSKSLRALALLGAGVSGLLSFATIASADEAEHGLECANYPWPHSGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVADGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGISIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIFLLSLALLQAAYFRRLRWSVYKSRKLIVDVVN* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1478 310 Pfam Cytochrome C1 family 81 297 IPR002326 GO:0009055|GO:0020037
Vvi14g1478 310 FunFam Cytochrome c1, heme protein 70 265 - -
Vvi14g1478 310 SUPERFAMILY Cytochrome c 75 264 IPR036909 GO:0009055|GO:0020037
Vvi14g1478 310 Gene3D - 266 309 - -
Vvi14g1478 310 PANTHER CYTOCHROME C1 24 307 IPR002326 GO:0009055|GO:0020037
Vvi14g1478 310 FunFam Cytochrome c1, heme protein, mitochondrial 266 310 - -
Vvi14g1478 310 PRINTS Cytochrome C1 signature 246 265 IPR002326 GO:0009055|GO:0020037
Vvi14g1478 310 PRINTS Cytochrome C1 signature 99 118 IPR002326 GO:0009055|GO:0020037
Vvi14g1478 310 PRINTS Cytochrome C1 signature 215 226 IPR002326 GO:0009055|GO:0020037
Vvi14g1478 310 PRINTS Cytochrome C1 signature 226 245 IPR002326 GO:0009055|GO:0020037
Vvi14g1478 310 PRINTS Cytochrome C1 signature 265 280 IPR002326 GO:0009055|GO:0020037
Vvi14g1478 310 PRINTS Cytochrome C1 signature 79 98 IPR002326 GO:0009055|GO:0020037
Vvi14g1478 310 PRINTS Cytochrome C1 signature 177 201 IPR002326 GO:0009055|GO:0020037
Vvi14g1478 310 PRINTS Cytochrome C1 signature 144 164 IPR002326 GO:0009055|GO:0020037
Vvi14g1478 310 ProSiteProfiles Cytochrome c family profile. 93 200 IPR009056 GO:0009055|GO:0020037
Vvi14g1478 310 Gene3D - 70 265 IPR036909 GO:0009055|GO:0020037
Vvi14g1478 310 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 265 309 IPR021157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1478 Vvi-Chr14 26153485 26165131 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1478 1 310 Chloroplast and Mitochondria Gene Families AT3G27240 85.484 0.0 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1478 K00413 - vvi:100250724 587.415