Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1468 ATGCGAGCTTACTCTGGTATCAGATCATCGGAGCTCCCCTCTCTCTCAAGAGGACCCTTTTCCATACCAAGGAATCGAGCTTATTTTCCCGGGAAAGTGTCCTTTTGCCAAGCCAAATTTGCTGAATCTGGGGTAGATGGGTCGTCAATCAGCTTAAGAGTGGTGCCTCCAAGCCTGTTAGCAGCAGAAAAAGAAGAAGCCAAGGCTGTGTTGAGCCTGTTCTTGAAAAAACAAGGCTTGAGCAATGCAGTTGCTGCTAGAACCATCAACAAGTCTGAACTTTTCATCGACCACCTTGTCTCTCGGCTTCATTCTGTTCATAAATCTCGATACCTAGTAGGACGAGAGCTTACAACACTTGAGATCAGGGATGCTCTAATTCCATACCTTGAGACCCTTTTTGAGGAGCATGGAGATATTTTGGTGGATGCTGTAGAAAACTTCCCAAATCAACCTGATAAAGAGATACCAGTAGCGCCAGTTTCTTCTTCTTCGTTGTCGTCCTCATCCTCTTCTTCTTCGTTGTCTTCATCGTCCTCTTCTTCTTCATCCAATCCAAAACTAGACTCCAAGAAGATAAAAGCCATGGCTCGAGTGAGTGAAGTAGGCCCTTCAGGAGAGCTCCCACCAAATATTCTCTACCTCTTAGAGCTTGGATTGGAACTGGATCAGATTAAGGCAATGACCCGCAGGTTCCCGGCTTTTCCCTACTACAGCCTAGAAGGTAAAATCATGCCAGTGGTTCAGTTTCTCCTGGATCTTGGGGTACCAAAATCAGGCATTCCCATGATCCTCTACAAAAGGCCTCAATTGTGTGGGGTCAGTTTATCTGAAAACATAATACCCACCATGGCATTTTTAGAGAACTTGGGTGTGGACAAGAAACAGTGGGCAAAAGTGATACATCGGTTTCCAGGATTTCTTACTTACAGCAGGCAGAAGGTGAAGGCAACTGTAGATTTCCTCGAGGAAATGGGTCTCTCGGCAGAGAGCATAGGCAAGGTTTTAACACGGTGCCCAAACATTATAAGTTACAGTGTGGAGGATAAACTACGGCCCACGGCTGAGTACTTCCGTTCATTAGGGGTTGATGTTGCCATTCTTCTCCACCGTTCTCCACCAACTTTTGGTCTAAGTATTGAGGCCAATTTAAAGCCCATTACAGAATTTTTCTTGGAAAAGGGATTCAGTATTGAGGAAGTTAGTACCATGATTTCAAGATATGGACCCCTTTATACGTTCAGCTTGGCAGATAGCTTGGGACCAAAGTGGGAGTTCTTTTTGACCATGGATTATCCAAGAACAGAGCTAGTTAAATTCCCCCAGTATTTTGGTTACAGTTTGGAAGAGAGGATTAAACCGAGGTATGCAACTGTAAGGGAGAGTGGAGTCAGGTTGCTGCTGAACCAGGTGTTATCTCTTTCAGAAAGTGAGTTTGACAAGGCTTTGAAAAGGAAAATGAAGAAAATGCATGATGGCAAGTCTTGA 1488 0.4456 MRAYSGIRSSELPSLSRGPFSIPRNRAYFPGKVSFCQAKFAESGVDGSSISLRVVPPSLLAAEKEEAKAVLSLFLKKQGLSNAVAARTINKSELFIDHLVSRLHSVHKSRYLVGRELTTLEIRDALIPYLETLFEEHGDILVDAVENFPNQPDKEIPVAPVSSSSLSSSSSSSSLSSSSSSSSSNPKLDSKKIKAMARVSEVGPSGELPPNILYLLELGLELDQIKAMTRRFPAFPYYSLEGKIMPVVQFLLDLGVPKSGIPMILYKRPQLCGVSLSENIIPTMAFLENLGVDKKQWAKVIHRFPGFLTYSRQKVKATVDFLEEMGLSAESIGKVLTRCPNIISYSVEDKLRPTAEYFRSLGVDVAILLHRSPPTFGLSIEANLKPITEFFLEKGFSIEEVSTMISRYGPLYTFSLADSLGPKWEFFLTMDYPRTELVKFPQYFGYSLEERIKPRYATVRESGVRLLLNQVLSLSESEFDKALKRKMKKMHDGKS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1468 495 SMART mt_12 434 465 IPR003690 GO:0003690|GO:0006355
Vvi14g1468 495 SMART mt_12 402 433 IPR003690 GO:0003690|GO:0006355
Vvi14g1468 495 SMART mt_12 226 257 IPR003690 GO:0003690|GO:0006355
Vvi14g1468 495 SMART mt_12 333 364 IPR003690 GO:0003690|GO:0006355
Vvi14g1468 495 SMART mt_12 366 397 IPR003690 GO:0003690|GO:0006355
Vvi14g1468 495 SMART mt_12 298 328 IPR003690 GO:0003690|GO:0006355
Vvi14g1468 495 SMART mt_12 262 293 IPR003690 GO:0003690|GO:0006355
Vvi14g1468 495 MobiDBLite consensus disorder prediction 153 189 - -
Vvi14g1468 495 PANTHER CGI-12 PROTEIN-RELATED 171 484 IPR003690 GO:0003690|GO:0006355
Vvi14g1468 495 Pfam mTERF 311 479 IPR003690 GO:0003690|GO:0006355
Vvi14g1468 495 Pfam mTERF 210 322 IPR003690 GO:0003690|GO:0006355
Vvi14g1468 495 Gene3D Transcription termination factor 3, mitochondrial 268 489 IPR038538 -
Vvi14g1468 495 MobiDBLite consensus disorder prediction 157 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1468 Vvi-Chr14 26071428 26073338 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vvi14g1468 mTERF 1.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1468 K15032 - vvi:100262724 904.434