Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1463 ATGGGGCTGTTGAACTTGGTTTTTTTGGCTTTTCTTTTTTGGGTTTTCTTTATTTCTCACACCCATCAAATGCAAAGCTCTCAAACTCAAGCGCTACTGCAGCTAAGGAAACATTTGGAATACCCTCTGGCACTGGAAATTTGGGAGAATTACAGTGGAGACTTCTGTAACCTGGCTTCAACCCCACACATGGCCATCACATGCCAAGACAATTCTGTCAGTGAGCTCAAAATTATGGGAGATAAGCATGTTAAGGTTAGTGATTTCAGCGGATTTGCAGTTCCTAATGAGACTCTGTCTGACGGTTTCTCTATTGATTCTTTTGTTACAACATTGTCGAGGTTATCGGGCTTAAGGGTTCTTAGTCTAGTGTCTTTGGGGATTTGGGGACCACTTCCTGATAAAATCCATAGGTTGGCTTTACTTGAAGTATTGGATTTGAGCTCAAATTTTATGTTTGGTTCCATTCCACCGAAGGTATCTACCTTGGTGAAACTCCAAACCCTCACATTGGATGCTAATTTCTTCAATGACAGTGTCCCCGATTGGATGGATTCGTTGTCCAATCTCTCTAGTTTGAGCTTGAGGAATAACCGGTTTAAGGGTCAGTTTCCTCCTTCTATATCCAGAATTGCAACACTCACGGATGTTGCTCTGTCTCACAATGAGCTTTCTGGTAAATTACCCGATTTGAGTTCCTTAACTAATCTGCATGTATTGGATTTAAGAGATAACCATTTGGATTCCGAACTACCCATCATGCCCAAAGGACTGGTTACAGCCCTCCTAAGTGAGAACTCCTTCTCAGGCGAGATTCCAGCCCAACTAGGAGAATTGGCTCAGCTCCAACATCTTGATCTGTCGTTCAATTCTCTTACTGGAACACCTCCCTCTGCATTGTTCTCTATGGCAAATATCAGTTATTTGAATTTAGCGTCCAATATGCTGAGTGGATCACTTCCTGACGGTCTAAGTTGTGGAGATGAACTTGGGTTTGTTGACATTTCTTCAAACAAGTTAATGGGCGTACTTCCTTCTTGCTTGAGCATTGCTTCAGATAGGAGAGTTGTTAAGTTTGGTGGAAATTGCTTTTCTATAGATGCTCAACACCAGCATCAAGAATCATACTGCAAAGCTGCCCATATAAAGGGAAAACAATCCAAGGGAAAAGAAATAGGAGTATTACTTGGTGCCATAGCAGGAGCTGTTATCATCGTGGCCTTTCTAGCATTTGTATTATTCATTTTATGTAGAAGGTGTAGAAAATACCCTTCAAGAGGGTCATTTGAGCAGCCTGCAATGCCAAAATTGGCACAAGAGAACTCTTCCACAGGGATTTCACCAGAGCTCCTTGCAAATGCTAGATTCATTTCTCAAGCAGCAAAGCTTGGGACACAAGGTTCCCCAACATATCGATTATTTTCCTTAGAGGAGTTAAAGGATGCCACAAATAATTTTGATCCAATGACATTTCTTGGTGAAGGATCTATTGGCAAGCTTTACAAGGGAAAGTTAGAAAATGGAGCATATGTTGGCATACGAACTATAACTTTGTATAGGAAATATTCAATTCGAAACCTTAAACTTCGCCTGGATTTGCTTTCAAAACTTCGTCATCCACATTTGGTTTCCCTATTGGGTCATTGCATTGATGGCGGTGGACAAGATGATTCCAATGTTGATAGATTCTTTCTTATATATGAATACATGCCCAATGGGAATTATCATACTCATCTCTCAGAAAATTGTCCGGCTAAGGTTCTTAAGTGGTCAGATAGATTGGCGGTTCTAATTGGTGTGGCAAAGGCTGTTCACTTTCTTCATACTGGAGTGATTCCAGGTTCTTTTAACAACCGACTGAAAACAAATAATATATTGCTAGACGAGCATAGGATAGCAAAGTTGAGTGACTATGGGATGTCCATCATTATGGAAGAGAATGAAAAAGTTGATGCAAAGAAGGAAGGAGGCAAACCATGGCAAAGGAAACAATTAGAGGATGATGTTTATAATTTCGGATTTATCTTGCTTGAATCACTCGTGGGCCCTATAGTAACTGGAAAAGGAGAGACGTTTCTGCTTAATGAAATGGCATCCTTTGGGAGTCAAGACGGTCGGAAGCGAATCGTGGATCCAATTGTACTAACCACATCCTCACAAGAATCATTATCAATTGTGGTATCAATCACAAGCAAATGTGTCTCTCCTGAACCATCTACCCGTCCCTCATTTGAGGATGTACTTTGGAACCTGCAGTATGCAGCTCAAGTCCAGGCCACAGCTGATGCTGATCAAAAATCTGATGGAGCATCCCAAACATAA 2322 0.4113 MGLLNLVFLAFLFWVFFISHTHQMQSSQTQALLQLRKHLEYPLALEIWENYSGDFCNLASTPHMAITCQDNSVSELKIMGDKHVKVSDFSGFAVPNETLSDGFSIDSFVTTLSRLSGLRVLSLVSLGIWGPLPDKIHRLALLEVLDLSSNFMFGSIPPKVSTLVKLQTLTLDANFFNDSVPDWMDSLSNLSSLSLRNNRFKGQFPPSISRIATLTDVALSHNELSGKLPDLSSLTNLHVLDLRDNHLDSELPIMPKGLVTALLSENSFSGEIPAQLGELAQLQHLDLSFNSLTGTPPSALFSMANISYLNLASNMLSGSLPDGLSCGDELGFVDISSNKLMGVLPSCLSIASDRRVVKFGGNCFSIDAQHQHQESYCKAAHIKGKQSKGKEIGVLLGAIAGAVIIVAFLAFVLFILCRRCRKYPSRGSFEQPAMPKLAQENSSTGISPELLANARFISQAAKLGTQGSPTYRLFSLEELKDATNNFDPMTFLGEGSIGKLYKGKLENGAYVGIRTITLYRKYSIRNLKLRLDLLSKLRHPHLVSLLGHCIDGGGQDDSNVDRFFLIYEYMPNGNYHTHLSENCPAKVLKWSDRLAVLIGVAKAVHFLHTGVIPGSFNNRLKTNNILLDEHRIAKLSDYGMSIIMEENEKVDAKKEGGKPWQRKQLEDDVYNFGFILLESLVGPIVTGKGETFLLNEMASFGSQDGRKRIVDPIVLTTSSQESLSIVVSITSKCVSPEPSTRPSFEDVLWNLQYAAQVQATADADQKSDGASQT* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1463 773 Gene3D Ribonuclease Inhibitor 258 392 IPR032675 -
Vvi14g1463 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 258 382 - -
Vvi14g1463 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 449 569 - -
Vvi14g1463 773 SMART LRR_typ_2 187 211 IPR003591 -
Vvi14g1463 773 SMART LRR_typ_2 303 327 IPR003591 -
Vvi14g1463 773 SMART LRR_typ_2 279 302 IPR003591 -
Vvi14g1463 773 SMART LRR_typ_2 139 163 IPR003591 -
Vvi14g1463 773 SMART LRR_typ_2 234 257 IPR003591 -
Vvi14g1463 773 ProSiteProfiles Protein kinase domain profile. 486 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1463 773 SUPERFAMILY Protein kinase-like (PK-like) 468 751 IPR011009 -
Vvi14g1463 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 25 256 - -
Vvi14g1463 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 570 770 - -
Vvi14g1463 773 Gene3D Ribonuclease Inhibitor 25 257 IPR032675 -
Vvi14g1463 773 SUPERFAMILY L domain-like 112 367 - -
Vvi14g1463 773 Pfam Leucine rich repeat 281 340 IPR001611 GO:0005515
Vvi14g1463 773 Pfam Leucine rich repeat 142 200 IPR001611 GO:0005515
Vvi14g1463 773 Pfam Protein tyrosine and serine/threonine kinase 491 748 IPR001245 GO:0004672|GO:0006468
Vvi14g1463 773 Gene3D Phosphorylase Kinase; domain 1 452 569 - -
Vvi14g1463 773 Gene3D Transferase(Phosphotransferase) domain 1 570 772 - -
Vvi14g1463 773 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 95 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1463 Vvi-Chr14 26033260 26037611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1463 1 699 Miscellaneous Gene Families AT5G14210 60.740 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Vvi14g1463 PK_Tyr_Ser-Thr 3.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1463 - - vvi:100261231 1454.11