Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1459 ATGGCTGCTCTCATCAATAACTTCTATCTAAGAGCTTTGTTTTTGTTCATCCTTGTATTTGTCTCCACTCTGGGACAGAGCTTGCTAAGCTGTGAGACCTCCTCCCGGGATGCTTCTGGCTACTACTGCAATGGAAATGGATCCCAGAAACAGTGTGGGACTTTTGCACTTCTTCGCACCAATTCCTACTACTCATCTCTTTTCAATCTGAGCTTCTACTTAGGGATTGATCGGTTCTTGATTGCAGAAGCAAATGGCTTCTCTGCTGACACAGAGTTACTTCCATACAATCTGCCTTTGTTGATCCCAATTGAATGTAAATGTAAGGCCGGTTTCTTTCAGGCTGAACTCACTAAAACTACCATAGAAGGGGAAAGCTTCTTTGGCATTGCTGAATCGCTGGAGGGCCTGACCACCTGCAAAGCCATCCGAGAAAGGAACCCGAGCATCCAACCATGGGGTCTTGCAGATAAAGTCCGGTTGCTAATCCCATTGAGATGTGCCTGCCCATCATCATCTGAACTTATTCAAGAAACAAAGCTTTTGCTGTCTTATCCCGTAAGTGAAGGTGATACGGTTCCTAGCTTAGCCTTCAAGTTCAATACTACTTCAGAAGCTATTATCTCAGCAAACAACAGATCAGGAGCAACTCTGAGACTAGGAAGCCTAGCACCGGTTTCATCGCTCCTGATTCCACTCAGAGATAAGCCCACCCTTGGTTCCCCTGCGAAGCCTCGTGAGCCGAATTTGGGTCTTCCAGCAACCAGCATCCCAGTAATTAATCCGCACAAGAAGAAAACAAAAATGTGGAAGATTGGAGTTTATATTGCAGTTAGTGGGGTTGCAGTTGGAGCAAGCGTTGCCATTGCTGCAGCCGTCTTGGTGATCCACTGGAAGCGGAAGAAGCAGAATGCTTACAAGATGGGAGATGTGGAGCTACAACAGCTTGGCTTGAGTGTAAGAACCACCAGTGAGAAAAAAGTCTCGTTTGAGGGATCCCAAGATCCTATCGATCAGATCATCGACTCCACCCCGCATAAGATTGTAGTGGAGACATACACTATGTTGGAGCTGAGAAAAGCTACAGAGGACTTCAATTCAAGCAATCTCATTGAGGGATCGGTGTTTCATGGTCGTCTCAATGGCAAGAACTTGGCAATAAAGCATACACATCCAGAAGCCATTTCCAAGATAGAGTTTGGGCTTTTTCATGATGCAATTCACCATCATCCCAACATAATGAGGCTGTTAGGGACATGCTTGAATGAAGGTCCTGATTCATATTTGATTTTTGAGTATGCCAAGAACGGGTCCTTGAAGGACTGGCTGCATGGTGGGCTGGCAATGAAGAGCCAATTCATTGCCTCCTGCTATTGTTTCTTGACATGGAACCAAAGGTTGAGGATTTGTCTTGATGTAGCAATGGCCTTGCAGTACATGCACCACATAATGCACCCCTGCTATGTTCACCGAAACATAAAAAGCCGAAACATCTTCTTAGATGAAGAGTTCAATGCTAAGATTGGGAATTTTGGCATGGCAAGATGTTTTGAAGATGATGCTGAAGACTCCCAGCCTTATTCAACTGCCTCTTGGAGTAAAGGGTATTTAGCTCCAGAATATCTTCACCAGGGTATAATCTCCCCAACCCTTGATATTTTTGCTTATGGGGTGGTTTTGCTGGAGGTTTTATCTGGGAAAACACCCATAACCAGGGCTGATGATAAGGGAGGAGGGAGAGTTTGGCTTCCAGAGAAAATCAAGTCCATATTAGGCTCAGAAAACACAGAGGAGCTCAGAGACTGGATGGACAGCGCATTGGGTGAGAATTATTCGTTTGATGCTGCCATCACATTGGCCAATCTTGCAAGAGTTTGCACAGACGAAAATCCATGCTCCAGACCCAGTGCTGGGGAAATTGTTGAAAAGTTATCAAGATTGGTGGAACAGCTACCAGAGGGAGAGCAATTTTCTATCTGCGAAAGCTCTTCCAAGCCCCTAGTCAAGGCTGCTGCAAACAGCCTATGA 2028 0.4541 MAALINNFYLRALFLFILVFVSTLGQSLLSCETSSRDASGYYCNGNGSQKQCGTFALLRTNSYYSSLFNLSFYLGIDRFLIAEANGFSADTELLPYNLPLLIPIECKCKAGFFQAELTKTTIEGESFFGIAESLEGLTTCKAIRERNPSIQPWGLADKVRLLIPLRCACPSSSELIQETKLLLSYPVSEGDTVPSLAFKFNTTSEAIISANNRSGATLRLGSLAPVSSLLIPLRDKPTLGSPAKPREPNLGLPATSIPVINPHKKKTKMWKIGVYIAVSGVAVGASVAIAAAVLVIHWKRKKQNAYKMGDVELQQLGLSVRTTSEKKVSFEGSQDPIDQIIDSTPHKIVVETYTMLELRKATEDFNSSNLIEGSVFHGRLNGKNLAIKHTHPEAISKIEFGLFHDAIHHHPNIMRLLGTCLNEGPDSYLIFEYAKNGSLKDWLHGGLAMKSQFIASCYCFLTWNQRLRICLDVAMALQYMHHIMHPCYVHRNIKSRNIFLDEEFNAKIGNFGMARCFEDDAEDSQPYSTASWSKGYLAPEYLHQGIISPTLDIFAYGVVLLEVLSGKTPITRADDKGGGRVWLPEKIKSILGSENTEELRDWMDSALGENYSFDAAITLANLARVCTDENPCSRPSAGEIVEKLSRLVEQLPEGEQFSICESSSKPLVKAAANSL* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1459 675 Gene3D Phosphorylase Kinase; domain 1 338 433 - -
Vvi14g1459 675 Pfam LysM domain 185 221 IPR018392 -
Vvi14g1459 675 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 22 651 - -
Vvi14g1459 675 FunFam PTI1-like tyrosine-protein kinase 3 434 657 - -
Vvi14g1459 675 CDD LysM 184 221 IPR018392 -
Vvi14g1459 675 Pfam Protein kinase domain 373 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1459 675 ProSiteProfiles LysM domain profile. 183 231 IPR018392 -
Vvi14g1459 675 Gene3D Transferase(Phosphotransferase) domain 1 434 662 - -
Vvi14g1459 675 Gene3D LysM domain 183 232 IPR036779 -
Vvi14g1459 675 SUPERFAMILY Protein kinase-like (PK-like) 343 644 IPR011009 -
Vvi14g1459 675 ProSiteProfiles Protein kinase domain profile. 356 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1459 675 SUPERFAMILY LysM domain 184 222 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1459 Vvi-Chr14 26008741 26010768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1459 40 672 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 42.643 6.92e-165 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vvi14g1459 Pkinase 2.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1459 - - vvi:100264694 1313.13