Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1454 ATGCCGGAGGAGACGACGGCGATCGATTACGTGATGGAGGCAGCTTCCGGTCCTCACTTCTCCGGCCTCCGCCTTGAAGGTCTCCTTTCTTCCCCTCCTTCTGCTACCTCTTCGCCTTCCGCGGCCGCTTCTGCTACTTCTTCGTTCTCTGCAACCCTACCTGATAGCGCTGCAAAACAGCCCTTCGTCATTGGAGTTTCAGGAGGTACAGCTTCAGGAAAGACTACTGTCTGTGACATGATCATTCAACAACTCCATGATCACCGAGTTGTGCTTGTCAACCAGGATTCTTTTTACCGTGGCTTGACTGCTGAAGAATCAGAACGTGTACATGAGTATAATTTTGATCATCCTGATGCTTTTGACACTGAACAACTTCTAGAGTGCATTGGAAAGCTCAAATCTGGGCAATCTGTCCATGTACCAATATATGATTTTAAGAATCATCGTCGATGTTCAGGAAGTTTTCGGCAGGTAAACGTATCTGATGTAATTATCCTGGAGGGAATTCTTGTTTTCCATGATCAACGTGTACGCAACTTGATGAACATGAAGATTTTTGTTGACACAGATGCTGATGTGAGGCTTGCCCGTAGAATAAGGCGTGACACAGTTGAGCGGGGTAGGGATGTAAATTCTGTTCTTGAGCAGTATGCAAAGTTTGTCAAGCCTGCTTTTGATGATTTTGTTATGCCATCAAAGAAGTATGCTGATGTGATCATACCCCGGGGAGGGGATAATCATGTTGCCATTGATTTGATCGTGCAACATATCCACACAAAACTTGGTCAGCATAATCTCTGCAAAATTTATCCCAATGTAAATGTTATTCAATCTACATTCCAGATAAGAGGTATGCACACACTGATTCGGGACCATGAAATATCAAAGCATGATTTTGTTTTCTATTCAGATCGTCTTATTCGACTGGTTGTGGAGCATGGCCTTGGCCATTTGCCATTTACTGAGAAGCAAGTAGTCACTCCAACAGGATCATTATATACTGGGGTTGACTTTTGCAAGAAACTATGTGGAGTTTCTATTGTCCGAAGGTGA 1056 0.4394 MPEETTAIDYVMEAASGPHFSGLRLEGLLSSPPSATSSPSAAASATSSFSATLPDSAAKQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEESERVHEYNFDHPDAFDTEQLLECIGKLKSGQSVHVPIYDFKNHRRCSGSFRQVNVSDVIILEGILVFHDQRVRNLMNMKIFVDTDADVRLARRIRRDTVERGRDVNSVLEQYAKFVKPAFDDFVMPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHNLCKIYPNVNVIQSTFQIRGMHTLIRDHEISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSLYTGVDFCKKLCGVSIVRR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1454 351 Gene3D - 57 264 IPR027417 -
Vvi14g1454 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 254 IPR027417 -
Vvi14g1454 351 PRINTS Uridine kinase signature 61 78 - -
Vvi14g1454 351 PRINTS Uridine kinase signature 229 242 - -
Vvi14g1454 351 PRINTS Uridine kinase signature 136 151 - -
Vvi14g1454 351 PRINTS Uridine kinase signature 193 203 - -
Vvi14g1454 351 PRINTS Uridine kinase signature 207 218 - -
Vvi14g1454 351 PRINTS Uridine kinase signature 91 102 - -
Vvi14g1454 351 NCBIfam uridine kinase 59 261 IPR000764 -
Vvi14g1454 351 Pfam Phosphoribulokinase / Uridine kinase family 63 249 IPR006083 GO:0005524|GO:0016301
Vvi14g1454 351 CDD UMPK 63 261 IPR000764 -
Vvi14g1454 351 FunFam Uridine kinase 58 264 - -
Vvi14g1454 351 SUPERFAMILY PRTase-like 276 351 IPR029057 -
Vvi14g1454 351 Gene3D - 265 351 IPR029057 -
Vvi14g1454 351 PANTHER URIDINE KINASE 48 350 - -
Vvi14g1454 351 Pfam Uracil phosphoribosyltransferase 279 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1454 Vvi-Chr14 25968290 25979946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1454 1 350 PRT Gene Family AT3G27190 82.336 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1454 K00876 - vvi:100257790 676.396