Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1446 ATGATTGTCCTCCTAATAGCCAAAAGTGTTGGTGACTGCATCAACCCAAGCATTTATGAGATAATACTGCACCTCAAAGGCCTGCCTTTCTTGGATGCGAATCCTGAGCCATGGATGAGAAATTTTACTGCTGGGGAGCTTGCAGATGTCAAGCCACAAGTAGTTACCCTTCGCGGAGTGGAAAAGGCAGCCCGCATTGTAGATGTCATGAGAAAACAACACGCACAATGGTTTCCCAGTTGTAGATGA 249 0.4618 MIVLLIAKSVGDCINPSIYEIILHLKGLPFLDANPEPWMRNFTAGELADVKPQVVTLRGVEKAARIVDVMRKQHAQWFPSCR* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1446 82 Gene3D Clc chloride channel 1 33 - -
Vvi14g1446 82 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1446 Vvi-Chr14 25885255 25885503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1446 1 79 Ion Channels AT3G27170 72.152 1.13e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1446 K05016 - vvi:100260066 137.117