Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1443 ATGAGAAATTTAACTGTTGGGGAGCATGCAGATGCCAAGCCACAAGTTGTTACCCTTGGTGAAGTGGAAAAGGTAGCCCGCCTTGTAGATGTCCTGAGAAACACCACGCACAATGGTTTCCCAGTTGTAGATGAAGGGCTGGAGCCACCGGTTGGTCTGGTCATAGGAGCAACTGAACTGCATGGAATTGTGCTAAGAGCACACCTTGTTAAAGTGCTGAAGAAGTGGTTCCTGCCAGAGAGAAGGAGAACAGAGTGGGAAGTGTCTCCAGTAGTTGGGATCTTGACCAGGCAGGATTTGAGAACCTACAACAAGTTGACAGCCTTTCCTCATCTAGCGAAATCTAAGGAAACTGAGCAGCTTTTACGGAGCATTATCTTAATTTATTTTTCAACATTTTTGTAG 405 0.4568 MRNLTVGEHADAKPQVVTLGEVEKVARLVDVLRNTTHNGFPVVDEGLEPPVGLVIGATELHGIVLRAHLVKVLKKWFLPERRRTEWEVSPVVGILTRQDLRTYNKLTAFPHLAKSKETEQLLRSIILIYFSTFL* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1443 134 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 112 - -
Vvi14g1443 134 Pfam CBS domain 14 74 IPR000644 -
Vvi14g1443 134 SUPERFAMILY CBS-domain pair 2 100 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1443 Vvi-Chr14 25878224 25878769 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1443 1 88 Ion Channels AT3G27170 74.444 2.75e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1443 K05016 - vvi:104878400 173.711