Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1402 ATGGAGGTGGTTATGGAAGAAAGCCAATTAGGGTTTCCGTACTGGAGCTCAGTTCGACGGAGATTCGGCCCAGAATCTCCTTTCTTTACTTCCGGAAACATTGAGAGAGAACTTCTCGCCAAACAGGTTGCATTGGACTTAACTGAAGATGAAAAGCAACATCTTCAGAATTTGGAAGATGAAGAAGGCAGGGGCTTATTTTGTCCAATTGTTGGTTGTGGGGCACGCTTGACTTCTTTGGAAGGCTTTGAAGATCACTATAATGCACGACATACTGCATCTTGCTCGGTTTGCTCAAGAGTTTACCCAACATCCCGCCTGCTCAGCATACATGTGTCAGAAGCACATGATTCTTTCTTTCAGGCAAAAGTTGCTCGTGGTTATGCAATGTATGAATGCTTGGTCGAAGGCTGTGGTATGAAGCTTAAGAGCTATAAAAGTCGTCAGCAGCATCTGGTGGACAAACATAAATTCCCCACTTCCTTTGAGTTCTTTAAGAAGGGCCAGCCATCCAAGAAACGGAGGCAGAAACTCCAACGTAAACAAGCTGTTCACAAGAGGGAGGAGGCTTCAAGCACCATGGAAATAGAAGAAGAAACTATTAGTGGCCTTGTTTCAGCAGTCTCAAAATTAAGCACTTCAGACTCAACTCCTTCCTCTGTCAGCTTTGGCCGTCACCACACTCGTGGCTTCACATTTGTCCCTCGTGCTGTTCAGAATGAAAAAAGGCCAGACTCCACACAAGCAATTACTAAGAGATAG 762 0.4501 MEVVMEESQLGFPYWSSVRRRFGPESPFFTSGNIERELLAKQVALDLTEDEKQHLQNLEDEEGRGLFCPIVGCGARLTSLEGFEDHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYAMYECLVEGCGMKLKSYKSRQQHLVDKHKFPTSFEFFKKGQPSKKRRQKLQRKQAVHKREEASSTMEIEEETISGLVSAVSKLSTSDSTPSSVSFGRHHTRGFTFVPRAVQNEKRPDSTQAITKR* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1402 253 SMART c2h2final6 131 156 IPR013087 -
Vvi14g1402 253 SMART c2h2final6 66 91 IPR013087 -
Vvi14g1402 253 SMART c2h2final6 93 116 IPR013087 -
Vvi14g1402 253 MobiDBLite consensus disorder prediction 168 193 - -
Vvi14g1402 253 ProSitePatterns Zinc finger C2H2 type domain signature. 95 116 IPR013087 -
Vvi14g1402 253 MobiDBLite consensus disorder prediction 213 253 - -
Vvi14g1402 253 PANTHER UNCHARACTERIZED 7 242 IPR039258 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1402 9 249 C2H2 Transcription Factor Family AT5G14140 67.742 1.32e-124 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vvi14g1402 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1402 - - vvi:100249687 489.96