LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi14g1400	ATGGTGAAACAATCGGTATCCGTCAAGGTTAGCCAGACGTTCAACACAATCCCGGCCAGTCTTCGACTGTTTTTCCATGACTGCTTTGTTGAGGGATGTGATGCCTCAGTCCTGATTTCATCACCAAATGGGGATGCGGAGAAGGATTCTAAAGATAATCACTCCCTTGCAGGAGACGGTGCCTGTGACACCGTATTCAAAGCCAAGCAAGCAGTAGAAGCAGCATGCCCAGAGATAGGCCCTTGTGCAGATATTCTGGCTCTAGCTGCCAGAGATGTTGTAGCCCTGGTTGGAAGCCCTTGA	303	0.4983	MVKQSVSVKVSQTFNTIPASLRLFFHDCFVEGCDASVLISSPNGDAEKDSKDNHSLAGDGACDTVFKAKQAVEAACPEIGPCADILALAARDVVALVGSP*	101

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi14g1400	100	Gene3D	-	1	100	-	-
	Vvi14g1400	100	PANTHER	-	1	100	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi14g1400	100	SUPERFAMILY	Heme-dependent peroxidases	2	100	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Vvi14g1400	100	Pfam	Peroxidase	3	100	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vvi14g1400	100	ProSiteProfiles	Plant heme peroxidase family profile.	1	100	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vvi14g1400	100	PRINTS	Plant peroxidase signature	60	73	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi14g1400	100	PRINTS	Plant peroxidase signature	79	89	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi14g1400	100	PRINTS	Plant peroxidase signature	19	39	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vvi14g1400	100	PRINTS	Haem peroxidase superfamily signature	80	97	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vvi14g1400	100	PRINTS	Haem peroxidase superfamily signature	98	100	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi14g1400	Vvi-Chr14	25586478	25587540	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi14g1400	1	100	Peroxidase	AT5G14130	70.000	3.49e-42	139

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi14g1400	K00430		-	vvi:100249751	144.436

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