Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1399 ATGCTTGCGAGACACAACCTTAGCCAGCTTGATATGATAGCATTGTCTGGAGCACACACTCTAGGCTTCTCCCACTGCAGCCGCTTTGCCAACCACCTTTACTCATTCTCCTCATCCTCCCCGGTGGACCCTTCTCTAGACCGAGATTACGCCAAGCAGCTAATGTCAGTTTGCCCTCAGAATGTGGATCCCAGCATAGCAATTGACATGGATCCTGTAACCTCACGAACATTTGACAATGTGTATTACCAGAATCTGGTGGCAGGAAAGGGTTTGTTCACTTCAGATGAGGCACTGATCCTGCATCTCAGCCTATACAGCCACTGA 327 0.4924 MLARHNLSQLDMIALSGAHTLGFSHCSRFANHLYSFSSSSPVDPSLDRDYAKQLMSVCPQNVDPSIAIDMDPVTSRTFDNVYYQNLVAGKGLFTSDEALILHLSLYSH* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1399 108 Gene3D Peroxidase, domain 2 1 104 - -
Vvi14g1399 108 Pfam Peroxidase 3 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g1399 108 ProSiteProfiles Plant heme peroxidase family profile. 1 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g1399 108 PRINTS Haem peroxidase superfamily signature 71 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g1399 108 PRINTS Haem peroxidase superfamily signature 11 26 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g1399 108 FunFam Peroxidase 1 105 - -
Vvi14g1399 108 ProSitePatterns Peroxidases proximal heme-ligand signature. 11 21 IPR019793 -
Vvi14g1399 108 PRINTS Plant peroxidase signature 69 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g1399 108 PRINTS Plant peroxidase signature 85 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g1399 108 PRINTS Plant peroxidase signature 10 22 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g1399 108 SUPERFAMILY Heme-dependent peroxidases 2 102 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi14g1399 108 PANTHER - 2 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1399 Vvi-Chr14 25586049 25586375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1399 1 99 Peroxidase AT4G37530 58.586 2.19e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1399 K00430 - vvi:100266922 213.386