Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1398 ATGATTCGATTACCAGAGAGGTTTAGAGCGTTTTTAAACAACAGATGGCTGGTATTTGTGGCCGCAATGTGGATACAGTCGTGTGCCGGAATTGGGTACTTGTTTGGGAGTTTATCGCCGGTGATGAAGAGCTCTCTCAATTACAATCAGAGGCAGATTGCAAAGTTGGGTGTGGCTAAGGATATTGGAGACAGTATTGGGTTTTGGATTGGGAGCCTGTGTGAGATTTTGCCTCTGTGGGCTGTTCTGCTCGTTGGTGCTTTGCAGAATTTTATTGGGTATGGGTGGGTTTGGTTGATTGTCACTCATCGAGTTCCAACACTGCCTTTGTGGGCTATATGCATTCTTATATTTGTGGGAACAAATGGTGAGACCTACTTCAATACGGTGGATCTGGTTTCCTGTGTGCAAAATTTCCCAAAGAGCCGGGGGCCTGTGGTTGGAATATTAAAAGGCTTTGCTGGGTTGAGTGGCGCCATTTTGACACAGATATATACCATGATCCATTCCCCTGATCACGCATCCCTCGTATTCATGGTTGCAGTGGGTCCAATAATGGTAGTTTTTGCCCTAATGTTCATTGTTAGGCCTGTTGGAGGTCACAGACAAGTCCGGCCAACTGATGACTTAAGTTTCACATTCATCTATGGTGTCTGCCTCCTTTTGGCTGCTTATTTGATGGGGGTCATGCTTGTCCAAGATCTAGTTCACTTAAGCCACACAGTGGTCACAATTTTTACAGCAATTTTGTTTGTCCTCATTTTAGCACCAATTGTGATTCCTGTGTCACTGAGTTTTTTCTCAGAGCCAAAAGCTCCTGAAGCAGAGGCTCTTCTAACAGAGCCACAGAAAGACGAACCTGGCAAGTCCGAACAGGATGCAACTGAGGTTATATTTAGTGAGGTGGAAGATGAGAAGCCTAAGGAAGTAGACTTGCTTCCAGCATCAGAAAGGCAAAAACGAATTGCCCATTTGCAAGCAAAACTGTTCCAAGCAGCTGCAGAAGGAGCTGTGAGGGTCAAGAGGAGGAGGGGGCCGCATAGAGGGGAGGACTTTACCCTGATGCAGGCTTTGATTAAGGCAGACTTTTGGCTTATCTTTTTCTCACTTCTTTTGGGTTCTGGATCTGGTTTGACAGTGATTGATAATTTGGGACAGATGAGCCAGTCTTTAGGATATCATAATACACATATATTTGTATCCATGATCAGCATTTGGAATTTTCTTGGTCGAATTGGTGGAGGTTACTTCTCTGAGATGATAGTCAGGGACCATGCTTACCCACGGCCAGTGGCCATGGCAGCGGCCCAAGTTATAATGGCACTCGGACACTTATTCTTTGCTATGGGATGGCCTGGGGCAATGCACATTGGTACTCTATTGATTGGGCTTGGTTATGGGGCCCACTGGGCAATTGTGCCGGCTGCTGCCTCTGAGTTGTTTGGCTTGAAGAACTTTGGGGCTTTATACAATTTTCTCACGCTTGCAAACCCTGCAGGTTCACTAGTGTTTTCTGGTGTCATTGCTAGCAGTATATATGATCGTGAAGCGGAGAAACAAGCTCATCACCACCATCACCTGCAGCAGAACGTAGGATCGATTTTCTCTGGCATGCTTAGTATGGATGACCCTCCAAAATGTGAAGGTTCCATATGCTTCTTTCTCACTTCTATGATAATGTCTGGTCTCTGCATTATAGCAGTTGTTTTAAGCATGGTACTTGTACATCGGACAAAGATTGTCTATGCCAACCTCTATGGAAAATCACGTACTTGA 1776 0.4527 MIRLPERFRAFLNNRWLVFVAAMWIQSCAGIGYLFGSLSPVMKSSLNYNQRQIAKLGVAKDIGDSIGFWIGSLCEILPLWAVLLVGALQNFIGYGWVWLIVTHRVPTLPLWAICILIFVGTNGETYFNTVDLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYTMIHSPDHASLVFMVAVGPIMVVFALMFIVRPVGGHRQVRPTDDLSFTFIYGVCLLLAAYLMGVMLVQDLVHLSHTVVTIFTAILFVLILAPIVIPVSLSFFSEPKAPEAEALLTEPQKDEPGKSEQDATEVIFSEVEDEKPKEVDLLPASERQKRIAHLQAKLFQAAAEGAVRVKRRRGPHRGEDFTLMQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYHNTHIFVSMISIWNFLGRIGGGYFSEMIVRDHAYPRPVAMAAAQVIMALGHLFFAMGWPGAMHIGTLLIGLGYGAHWAIVPAAASELFGLKNFGALYNFLTLANPAGSLVFSGVIASSIYDREAEKQAHHHHHLQQNVGSIFSGMLSMDDPPKCEGSICFFLTSMIMSGLCIIAVVLSMVLVHRTKIVYANLYGKSRT* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1398 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 583 - -
Vvi14g1398 591 SUPERFAMILY MFS general substrate transporter 5 198 IPR036259 -
Vvi14g1398 591 Gene3D MFS general substrate transporter like domains 363 577 IPR036259 -
Vvi14g1398 591 FunFam Nodulin family protein 354 584 - -
Vvi14g1398 591 CDD MFS_Mch1p_like 15 568 - -
Vvi14g1398 591 Pfam Nodulin-like 15 262 IPR010658 -
Vvi14g1398 591 SUPERFAMILY MFS general substrate transporter 212 579 IPR036259 -
Vvi14g1398 591 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1398 Vvi-Chr14 25581582 25585195 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1398 6 591 Nodulin-like Gene Family AT5G14120 75.212 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1398 - - vvi:100244537 1162.52