Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1396 ATGCAGATATGCATTCTTATATTTGTGGGAACAAATGGTGAGACCTACTTCAATACGGTGGATCTGGTTTCCTGTGTGCAAAATTTCCCAAAGAGCCGGGGGCCCGTGGTTGGAATATTAAAAGGCTTTTCTGGGTTGAGTGGCGCCATTCTGACGCAGATATATACCATGATCCATTCCCCTGATCACGCATCCCTCGTATTCATGGTTGCAGTGGGTCCAACAATGGTAGTTTTTGCTCTAATGTTCATTGTTAGACCTGTTGGAGGTCACAGACAAGTCCGGCCAACTGATGACTTAAGTTTCACATTCATCTATGGTGTCTGCCTCGTTTTGGCTGCTTATTTGATGGGGGTCATGCTTCTTCAAGACCTAGTTGACTTAAGCCACACAGTGGTCACAATTTTTACAGCAATTTTGTTTGTCCTCGTTTTGGTACCAATTGTGATTCCTGTGTCATTGAGTTTTCCCTCAGAGCCAAAAGCTCCTGAACTAGAGGCTCTTCTAACAGAGCCACAGAAAGAAGAACCTGGCAAGTCCGAACAGGATGCAACTGAGGTTATATTTAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTAGACTTGCTTCCAGCATCAGAAAGGCAAAAACGAATTGCCCATTTGCAAGCAAAACTGTTCCAAGCAGCTGCAGAAGGAGCTGTGAGGGTCAAGAGGAGGAGGGGGCCACGTAGAGGGGAGGACTTTACCCTGATGCAGGCTTTGATTAAGGCGGACTTTTGGCTTATCTTTTTCTCACTTCTATTGGGTTCTGGATCTGGTTTGACAGTGATTGATAATTTGGGACAGATGAGCCAGTCTTTAGGATATGATAATACACATATATTTGTATCCATGATCAGCATTTGGAATTTTCTTGGTCGAATTGGTGGAGGTTACTTCTCTGAGATGATAGTCAGGGACTATGCTTACCCACGGCCAGTGGCCATGGCAGTGGCCCAAGTTACAATGGCACTTGGACACTTATTCTTTGCTATGGGATGGCCCGGGTCACTGTACATTGGTACTCTATTGATTGGGCTTGGTTATGGAGCCCACTGGGCAATTGTGCCAGCTGCTGCCTCTGAGTTGTTTGGCTTGAAGAACTTTGGGGCTTTATACAATTTTATCAATCTTGCAAATCCTACAGGTTCACTAGTGTTTTCTGGTGTCATTGCTAGCAGTATCTATGATCGTGAAGCGGAGAAACAAGCTCATCACCACCATCACCAGCAGCAGAACATGGGATCAATTTTCTCTGGCATGCTTAGTGTGGATGACCCTCCAAAATGTGAAGGTTCCATATGCTTCTTTCTCACTTCTATGATAATGTCTGGTATCTGCATTATAGCAGTTGTTTTAAGCATGGTACTCGTACATCGGACAAAGGTCGTCTATGCCAACCTCTATGGAAAATCACGTACTTGA 1446 0.4467 MQICILIFVGTNGETYFNTVDLVSCVQNFPKSRGPVVGILKGFSGLSGAILTQIYTMIHSPDHASLVFMVAVGPTMVVFALMFIVRPVGGHRQVRPTDDLSFTFIYGVCLVLAAYLMGVMLLQDLVDLSHTVVTIFTAILFVLVLVPIVIPVSLSFPSEPKAPELEALLTEPQKEEPGKSEQDATEVIFSELEDEKPKEVDLLPASERQKRIAHLQAKLFQAAAEGAVRVKRRRGPRRGEDFTLMQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHIFVSMISIWNFLGRIGGGYFSEMIVRDYAYPRPVAMAVAQVTMALGHLFFAMGWPGSLYIGTLLIGLGYGAHWAIVPAAASELFGLKNFGALYNFINLANPTGSLVFSGVIASSIYDREAEKQAHHHHHQQQNMGSIFSGMLSVDDPPKCEGSICFFLTSMIMSGICIIAVVLSMVLVHRTKVVYANLYGKSRT* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1396 481 SUPERFAMILY MFS general substrate transporter 102 469 IPR036259 -
Vvi14g1396 481 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 473 - -
Vvi14g1396 481 Pfam Nodulin-like 2 152 IPR010658 -
Vvi14g1396 481 Gene3D MFS general substrate transporter like domains 194 412 IPR036259 -
Vvi14g1396 481 FunFam Nodulin family protein 244 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1396 Vvi-Chr14 25570355 25571898 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1396 3 481 Nodulin-like Gene Family AT5G14120 73.237 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1396 - - vvi:100266857 884.404