Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1387 ATGGAGAATTATCAGAACTTCTTCGCTTGCTCGTCATCGGCGCCGCCACCAGCTTCGATGGGTTTTACATCAAACATGGAGAGTTCCAATGTTTTCGGTAATGTCCATGGTCACAGTATTCCAAATGGGTTCTTGGGGTTGAAGTCCACGGAGATCCATGTCCCTACAGGACAAGAAGTCGAGAACATTTCTAGGAGCAGTGGAGGCTTTGGTAGGTCTGAGAATGAGGTGAAATCTTGTAAGAAGAAGTATGAGAAGAAGATCAGGAAGCCCAGATATGCTTTTCAAACCAGGAGCCAGGTTGATATACTTGATGATGGATATAGATGGAGGAAGTACGGTCAAAAGGCAGTTAAGAACAACAAATTTCCAAGAAGCTACTACAGATGTACCCATCAGGGATGCAATGTAAAGAAGCAGGTGCAACGCCTATCCAAAGATGAAAGCATTGTGGTGACTACTTATGAAGGGGTGCACACACATCCAATCGAGAAGCCCACCGACAATTTCGAACATATCTTGAATCAGATGCAAATCTACGCTCCCTAA 549 0.4444 MENYQNFFACSSSAPPPASMGFTSNMESSNVFGNVHGHSIPNGFLGLKSTEIHVPTGQEVENISRSSGGFGRSENEVKSCKKKYEKKIRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSKDESIVVTTYEGVHTHPIEKPTDNFEHILNQMQIYAP* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1387 182 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 166 IPR044810 GO:0003700
Vvi14g1387 182 Gene3D WRKY domain 91 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi14g1387 182 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi14g1387 182 SUPERFAMILY WRKY DNA-binding domain 96 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi14g1387 182 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi14g1387 182 FunFam WRKY transcription factor 57 90 164 - -
Vvi14g1387 182 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1387 Vvi-Chr14 25479103 25481616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1387 92 181 WRKY Transcription Factor Family AT5G13080 86.667 7.63e-57 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi14g1387 WRKY 3.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1387 - - vvi:100263502 357.066