Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1373 ATGATCAATTCTCTCTGTGGAAGCATGGGGTCTCTGAACAGCGAGAGCTCATGCACGAAACTGCAGCAGCCAACTTCCCCGAATAAGTCGATTTTGGAGTCAAGAAAGGCTCCTCTCTCGTCTGATTTGGAATCAAACAGCTTGGCCCCGTCCAGCCTCAACTTGCATGGACTCAAGTTTGATGTGGATGGAGATGCTGAAGTCCAGTCACCTGACAGTTCAATGTGGGAGGCCTTTTTCACTGATCACTTCGACTCTGATTTCATGATCTCGTCCCCGGTCAGGAGTTCACCAATGAATTACAATTACAACCATGTTCAATCAATGCAAGGGCAGAGCCTTCTGGGGTGCTCTCCTCCTCGCAATTCATCTCAACTAGGATCTTTCAGCAGCACCCACAAAGGGAAAGGACAGAGTCCACTCCATAAGGTTTTCAACTCTCCCACATATCAGTATATTCAGCCTGATACCCTTTCACTGCCACCTCTCGATAGTCTTTTGGATGATTACCAGAGAGATGGAGTTGGAGCATCTTCATACCCCATGATGAAGATACCGGCTGTGGGAATTTCCGGTGCTTCAAGTTTGGCACAGTACCTGGATATGCCAATAACAATTCATCCGACAGCGTTGGATTTGCCACTTCAGAACACTTGGAGGTTTTCTGGACCAGTGAGTGAATCCTCGGCCACTGGAGGTTCTCAACTAACCCAGGAGAAAGATATGTATCAGATGGGCTCTATGTCAAGCACTGCATCATTGTCACAGCAACTGCAAGAAGAACACCAGCAAGAGCAGCAACTTCAGCAGAAGCAGCAGCAATTGCAGGAGATCCAGAACCCTAACCATGGCTTGATGGTGCCTCATCCTCTTGGGTCTGAGCAGGAACATGATAGTGGCCTCCAACTGGTGCACTTTCTTCTTGCTTGCGCAGAAGCAGTCGCCAAAGAGGACTACATGTTGGCAAGGAGGTACCTGCACCACCTCAATCGGGTGGTTACTCCCCTTGGAGACTCCATGCAAAGAGTAGCCTCGTGCTTCACCGAAGCCTTGAGCGCAAGGCTTGCAGCAACTCTAACCCCGAAACCCAGTACCTCCACCACAAAGCCCTTCAATCCCTTCCCACCAAACTCGTTAGAAATCCTCAAGATTTACCAGATTCTCTATCAAGCCTGCCCCTACATCAAGTTCGCCCACTTCACTGCTAACCAAGCCATTTTTGAAGCCTTTGAAGCTGAAGAACGTGTTCATGTCATCGACCTCGATATCCTCCAAGGATACCAGTGGCCAGCCTTCATACAGGCCCTAGCCGCCCGACCCGGTGGCGCTCCATTTCTCCGTATAACAGGCGTCGGATGCTCTCCAGAAAGCGTGAGGGAGACGGGTCGTTGTTTAACTGAATTAGCCCATTCTCTCCATGTCCCATTTGAGTTCCACCCGGTTGGAGAGGAACTCGAGGACCTTAAGCCCCACATGTTCAACCGGCGGGTCGGCGAGGCTCTTGCTGTGAACTCCGCTAACCGCCTCCACCGCGTCCCAACAAATTTCCTGGGGAACCTGCTGGCCATGATCCGAGACCAAGCGCCCAATATCGTAACCATAGTGGAACAAGAAGCAAGCCATAACGGGCCTTACTTCCTGGGCAGATTCCTGGAAGCATTACACTATTACTCTGCAATTTTCGACTCCTTGGATGCAACATTCCCACCAGACTCCGCACAGAGGGCGAAGCTGGAGCAGTACATATTCGCACCAGTGATAAGGAACATAGTGGCGTGTGAGGGGGCAGAGAGGGTGATGAGGCACGAGAGGTTGGAGAAGTGGAGGAAACTAATGGAAGGGAAGGGTTTTCAGGGGGTACCACTGAGTGCAAATGCGGTGACACAATCCAAAATACTGTTGGGACTTTACTCATGCGATGGATACAGGTTGACGGAGGACAAGGGCTGCTTGCTCTTGGGGTGGCAAGATAGAGCCATTCTTGCTGCTTCGGCTTGGCGATGCTGA 2007 0.5087 MINSLCGSMGSLNSESSCTKLQQPTSPNKSILESRKAPLSSDLESNSLAPSSLNLHGLKFDVDGDAEVQSPDSSMWEAFFTDHFDSDFMISSPVRSSPMNYNYNHVQSMQGQSLLGCSPPRNSSQLGSFSSTHKGKGQSPLHKVFNSPTYQYIQPDTLSLPPLDSLLDDYQRDGVGASSYPMMKIPAVGISGASSLAQYLDMPITIHPTALDLPLQNTWRFSGPVSESSATGGSQLTQEKDMYQMGSMSSTASLSQQLQEEHQQEQQLQQKQQQLQEIQNPNHGLMVPHPLGSEQEHDSGLQLVHFLLACAEAVAKEDYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLAATLTPKPSTSTTKPFNPFPPNSLEILKIYQILYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFIQALAARPGGAPFLRITGVGCSPESVRETGRCLTELAHSLHVPFEFHPVGEELEDLKPHMFNRRVGEALAVNSANRLHRVPTNFLGNLLAMIRDQAPNIVTIVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKLEQYIFAPVIRNIVACEGAERVMRHERLEKWRKLMEGKGFQGVPLSANAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRAILAASAWRC* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1373 668 MobiDBLite consensus disorder prediction 1 31 - -
Vvi14g1373 668 Pfam GRAS domain family 303 667 IPR005202 -
Vvi14g1373 668 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 259 661 IPR005202 -
Vvi14g1373 668 MobiDBLite consensus disorder prediction 245 275 - -
Vvi14g1373 668 Coils Coil 251 278 - -
Vvi14g1373 668 ProSiteProfiles GRAS family profile. 294 667 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1373 Vvi-Chr14 25316395 25318488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1373 298 668 GRAS Transcription Factor Family AT1G66350 44.415 7.61e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vvi14g1373 GRAS 4.6e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1373 - - vvi:100263422 1275.77