Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1366 ATGCCAATCGTGGAACCAATGGAGTATTGTCGCTGCTTTGGTTTTAGGAAGGGGAGGAAATACCGAGGCAGCGACAGTATGCAAAAATTACAGCCATCCAGGACCTCCACCGACCCTGAACTGCCTTCAGGATCAAAACCAGAAGCATCAGTTGCAACAGATGGGGTTGCGGGTAACAAGACTCGTACATTCACATTCCGAGAACTTGCAACTGCAACAAACAATTTTAGGCAAGAGTCCCTTATAGGAGAAGGTGGATTTGGGACTGTTTATAAAGGGAAAATTGAAGGACTGGATCAGGTTGTAGCTGTTAAAATGCTAAATAAGAGTGGGCTCCAAGGGAATAAGGAATTTTTGGTAGAAGTTCTGATGCTTTCTCTCCTGTGCCACCCAAACCTTGTCAATATGATAGGTTACTGTGCTGAAGGGGACCAGCGCCTTCTCGTCTATGAATTCTTGCCTTTAGGATCCTTGGAACGTCACCTCCATGATCTTCCCCCGGATAAGGAGCCATTGGATTGGAACACAAGGATGAAGATAGCATGTGGTGCAGCCAAAGGATTGAGCTACCTACACCATGAAGCGCAGCCTCCTGTCATATACAGAGACCTAAAATCATCTAACATTTTGTTGGATGAGGGTTTCTATCCAAAACTGTCTGATTTTGGGTTCGCTAAGTTCGGTCCAGTTGAAGATAAGTCCCATGTCTCGACCAGGGTGATGGGCACCCATGGTTACTGTGCTCCTGAGTATGCCACAACGGGGAAACTAACAATCAAGTCTGACACATATAGTTTTGGGGTAGTTTTATTGGAGCTGATCACTGGACAATTTGCAATAGATCCCACCCGTGGCCATGGAAAAAAGATGCTTGTTGATAGGGTACTCCCCATATTAAAAGACCCCAAGAACTATCCCCGGTTGGCAGATCCACGGCTGAAGGGCCAGTTCCCAGAGTCTGCTCTACACCACGCTATAGAGCTGGCATCCATGTGTGTCCGGGAAAATGCTAATGCCCGTCCCCTAATGAAAGAAGTGGTGCTTGCTTTGGATTACTTGGTGGCCCATCCCTATGATCCCAACGCAGACAAGGATTCGAGGAAGAGAGGAGTAAGGACATCTGAGAATGGGGCAGATTTGAAAGGCCCTGAGAAGGAGACAATAGAAGTGGGGAAGAAGTTGAACAGCACCATAGATCGGGAGCAAGCAGTTGCAGAGGCCAAGAAGTGGGGGGAGAGTTGGAGAGACATGAAAGAAAAAGGGCAGAGTAGTAGTTGTAATAGCTAA 1287 0.4709 MPIVEPMEYCRCFGFRKGRKYRGSDSMQKLQPSRTSTDPELPSGSKPEASVATDGVAGNKTRTFTFRELATATNNFRQESLIGEGGFGTVYKGKIEGLDQVVAVKMLNKSGLQGNKEFLVEVLMLSLLCHPNLVNMIGYCAEGDQRLLVYEFLPLGSLERHLHDLPPDKEPLDWNTRMKIACGAAKGLSYLHHEAQPPVIYRDLKSSNILLDEGFYPKLSDFGFAKFGPVEDKSHVSTRVMGTHGYCAPEYATTGKLTIKSDTYSFGVVLLELITGQFAIDPTRGHGKKMLVDRVLPILKDPKNYPRLADPRLKGQFPESALHHAIELASMCVRENANARPLMKEVVLALDYLVAHPYDPNADKDSRKRGVRTSENGADLKGPEKETIEVGKKLNSTIDREQAVAEAKKWGESWRDMKEKGQSSSCNS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1366 428 MobiDBLite consensus disorder prediction 26 43 - -
Vvi14g1366 428 PANTHER OS07G0668900 PROTEIN 52 362 - -
Vvi14g1366 428 SUPERFAMILY Protein kinase-like (PK-like) 62 360 IPR011009 -
Vvi14g1366 428 Pfam Protein kinase domain 77 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1366 428 ProSiteProfiles Protein kinase domain profile. 76 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1366 428 FunFam probable serine/threonine-protein kinase RLCKVII 48 152 - -
Vvi14g1366 428 Gene3D Transferase(Phosphotransferase) domain 1 153 373 - -
Vvi14g1366 428 MobiDBLite consensus disorder prediction 361 428 - -
Vvi14g1366 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Vvi14g1366 428 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Vvi14g1366 428 MobiDBLite consensus disorder prediction 23 54 - -
Vvi14g1366 428 Gene3D Phosphorylase Kinase; domain 1 44 152 - -
Vvi14g1366 428 MobiDBLite consensus disorder prediction 402 419 - -
Vvi14g1366 428 CDD STKc_IRAK 82 347 - -
Vvi14g1366 428 FunFam Serine/threonine-protein kinase PBS1 153 368 - -
Vvi14g1366 428 MobiDBLite consensus disorder prediction 361 396 - -
Vvi14g1366 428 SMART serkin_6 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1366 Vvi-Chr14 25246374 25251047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1366 7 415 Glycoside Hydrolase AT3G07070 54.157 9.33e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vvi14g1366 Pkinase 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1366 K13430 - vvi:100259977 866.685