Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1361 ATGGAGAAGCCAAGCTTTGTCAGGAGTGGAGGGATGGTGAAATTGCCTATTGGGTTCAGGTTCCACCCCACTGATGAAGAGCTGGTGGTGCACTATTTGAAACGAAAGGCCCTCTCTTTTCCGTTGCCTGCTTCAGTCATTCCTGAGTTTGACGTTTTCCTAACCAATCCTTGGGATTTGCCTGGTGATGTGAAGGAGAGGAGATATTTTTTCAGCAGTGGGAAGGGTTTTGGGAACAAATGCAGAAGAGTAACCGGCTGTGGTTACTGGAAGGCTATTGGCAAAGACATACAAATTGTAGCTTCTGGGAGCAGCAGAGCAGTGGGGATGAAGAGAACTCTGGTTTTCTATGAAGGAAAGCTTGGGGCGGGGACGAGAACCCAATGGGTGATGCATGAATATCGCCTTGTGGGTCTTGGAACAGCTCCAAGTTCAACCCAGAAATGTGTGGAGGAAATGGAAGATTGGGTTGTATACAGGATGTTTCAGAAGAGGAGAAGACCAAAGAGACATGGGGTCAGTTCCCAGCCCTCTACCAACAACAAAGCTCAGAGCATCATTGATTTGGTGGTGGAAAACAGCTCTGATCCAGGTCCCCCTCAACCTTATTCACCATCATCTTCAAGTGAAATCAGTGAGCTCTCTGGTGTGGGTTTAGATCAGGAACAGGAAGGGAGCAGTGCTTACTCATGTTTTTCTTCATCTTCATATATGAGAGAGCACTGA 726 0.4725 MEKPSFVRSGGMVKLPIGFRFHPTDEELVVHYLKRKALSFPLPASVIPEFDVFLTNPWDLPGDVKERRYFFSSGKGFGNKCRRVTGCGYWKAIGKDIQIVASGSSRAVGMKRTLVFYEGKLGAGTRTQWVMHEYRLVGLGTAPSSTQKCVEEMEDWVVYRMFQKRRRPKRHGVSSQPSTNNKAQSIIDLVVENSSDPGPPQPYSPSSSSEISELSGVGLDQEQEGSSAYSCFSSSSYMREH* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1361 241 Gene3D NAC domain 24 168 IPR036093 GO:0003677|GO:0006355
Vvi14g1361 241 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
Vvi14g1361 241 Pfam No apical meristem (NAM) protein 16 136 IPR003441 GO:0003677|GO:0006355
Vvi14g1361 241 MobiDBLite consensus disorder prediction 192 241 - -
Vvi14g1361 241 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
Vvi14g1361 241 PANTHER NAC TRANSCRIPTION FACTOR 56 15 204 - -
Vvi14g1361 241 MobiDBLite consensus disorder prediction 205 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1361 Vvi-Chr14 25213383 25214336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1361 1 180 NAC Transcription Factor Family AT5G13180 49.180 8.38e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vvi14g1361 NAM 1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1361 - - vvi:100256653 455.677