Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1338 ATGGCGACTTCTGAAAACTCTCGACATTCTCTGATCCCTTGCTTCCTATACTCCTCCTCCTCGAAGAAGAGCCTTATTCTTGAGAAAATGGCGGCTTCTCCATCACCTGCAAATGGAGGAGTACCCAAGAGCTTCTTCGTTCCTGCTCCAAGCGAGCCGGGAAAGATCGAGATGTACTCTCCGGCGTTCTATGCTGCTTGTACCGCCGGTGGAATCCTAAGTTGCGGCCTGACTCACATGGCCGTCACTCCTCTTGACCTCGTCAAATGTAATATGCAGATTGACCCTGCAAAGTACAAGAGCATTTCGTCTGGATTTGGAGTTTTGCTGAAGGAGCAGGGAGTTAGGGGATTTTTCAGGGGTTGGGTGCCTACCCTGCTTGGTTATAGTGCACAGGGTGCTTGCAAGTTTGGATTCTATGAATTCTTCAAGAAGTATTACTCTGACATTGCTGGGCCAGAGTATGCTGCCAAGTACAAGACCTTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTAATTGCAGATGTTGCTCTTTGCCCCATGGAGGCAGTGAAGGTCCGGGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTGTCAGATGGATTTCCCAAGTTTGTTAAATCCGAAGGTGCCTTGGGATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCATATACAATGATGAAATTTGCTTCTTTTGAGACTATTGTTGAGATGCTTTACAAGTATGCCATTCCTACTCCGAAGGACCAGTGCAGTAAAACTCTGCAGCTTGGTGTGAGCTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTTTCTCATCCAGCTGACAATCTTGTCTCCTTCCTCAACAATGCTAAGGGCGCAACAGTTGGTGATGCTGTGAAGAACCTTGGATTGTGGGGTCTCTTCACCCGGGGGCTTCCCCTGCGTATTGTCATGATTGGAACTCTCACCGGAGCACAGTGGGGGCTATATGATGCTTTCAAAGTTTTCGTAGGACTGCCAACCACTGGTGGTATTGCTCCTGCTCCTCCTGCTCCAACGACTTCTGAGCTTGCAAAGGCCTAG 1092 0.4881 MATSENSRHSLIPCFLYSSSSKKSLILEKMAASPSPANGGVPKSFFVPAPSEPGKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGFPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMLYKYAIPTPKDQCSKTLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKNLGLWGLFTRGLPLRIVMIGTLTGAQWGLYDAFKVFVGLPTTGGIAPAPPAPTTSELAKA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1338 363 FunFam Phosphate carrier protein, mitochondrial 62 340 - -
Vvi14g1338 363 Pfam Mitochondrial carrier protein 65 148 IPR018108 -
Vvi14g1338 363 Pfam Mitochondrial carrier protein 163 247 IPR018108 -
Vvi14g1338 363 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 42 350 IPR044677 GO:0005315|GO:1990547
Vvi14g1338 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 62 146 IPR018108 -
Vvi14g1338 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 159 243 IPR018108 -
Vvi14g1338 363 SUPERFAMILY Mitochondrial carrier 65 335 IPR023395 -
Vvi14g1338 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 260 339 IPR018108 -
Vvi14g1338 363 Gene3D Mitochondrial carrier domain 62 340 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1338 Vvi-Chr14 25017305 25021982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1338 5 361 Chloroplast and Mitochondria Gene Families AT5G14040 79.144 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1338 K15102 - vvi:100253246 714.146