Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1326 ATGGATGACATTATGGGGAAGGCTCTTAAAGAAATAGAGGTCGTTAAAATGATGATTGCTAACGAGGATTACATGGGTGCCAGAACCAAGTTACATGAACTGCGGCATCATTTTCCAGCTCTTGATGGCATCTCAGGGATGATCACTGTCTGTGACATACTATCCTCTGCAGGCTATGGGTTCTTAGGTTGTGGGACCAACTGGTATTGGGTGCTTCAGATAATGAGAGCTGCAGGTGAAGCTGACATTCGATACCAGTTTCATAAATTTAAGAGACTTTTGGATCCCATCAAGACTAGCTTCCCTGGCACTGAATCTGCTCTGAAGATGATTCAGGATGCATTTTCTGTGCTTTCAGACCCAGAGAAGCGTGCAGTGTTTGATTTGGATTTGGATTCAACTTTAGAATGCGGATTTGTTGGAGAGAATCTTGTTCACAAGGAAGATATTGCACAAATTTCTGTCAGGTGTAGTAAATCTGTTTGTGATACCAGTGATGGAATCAATGAAGAGAGCAATTCAAAAGAATGTTCTTTAAAGAGGATAATAAATCAAGATCTTCTTGGCAAAATGGATCTTCACAATGCTGGAATGCCTACTCAAGCTGAGTTGATTAATGGGGTTTATGATCTCATAGAGGAGAGGGACGTTCATGATCCTGAAATACCTGCCCAGATTGAGGTCACAAATGGGATTCATGCTGATGATGAACAGAGGAAGGTGACCTGCACACAGGAAAGAAGCATGATTTCTGCTTGTGTGAAGAGGAGAATTACTGTAGGAACTGAGAAAACTGCAAACAGCATGTCCTCCTCCGTAGTTTCTGATTTTTTTTACAATTTTGAGTATATCAGAAAACCCCAATTATTCACAGTTGGCCAGGTTTGGGCTACTTATGATGATGAGAACATGCCTCGAAAGTATGCTCGGATTAATAGCATATATAAGTTTCCTTTTAGGTTGCACATCAGTTGGCTGATACCTGCACCAGTTACTGCACATGAGAGAAGATGGTGTGAGGTGGGTTTGCCTGTTGTGTGTGGATTTTTTAATGTGGATAGGAATGAAACTGTTGTTACTGAACCAAAAAAATTTTCCCATATGATCAACTGTTTTGCAAGTCCAAATGAGCAACTTCAAATTTATCCCCAAAATGGCGACATTTGGGCAATGTACAAAGATTGGAAACCATTTGAATGGTGCTCTAATCCTGAAGCTAGAAAAGGCTGCATTTTACGGATGGTTGAAATCATTGCAGGTTGCTCCAACCCAACTGGTGTTATGGCTGCAGGCTTGGTGAAAGTAGAATGGTTTAAAAATGTCTTTCAAAGATTCACAAACAATGGAAATGAGTATTCTTTTCCCATCCCTGCAAAAAATTTCTTTGTGTTCTCTCATAAAGTTCCAGCATTTAGATTCACCGGTGGAGAGATGGATAGAATCTCCAATGGGATGCTTGAACTAGACCCTTTGGCTGTTCCTGATGTTCTAGACTGTATCATGGCCAAACCAGTAGAAGGGAGTTCAAGTGGTTCTCCCACCTTCCTTCACAGCTGTCCTATTCCTCCTGTGCCGGAATCATTGAATTGGAAATGGTCAGCCAACAATTTTGCTTCAAATCAAATATGGGCTGTATATGTTGGTCCTGATTCCATGCCTCGGAAATATGTTGTAGTAAACAATGTGGTTTCAGGGTCTGAAGTGTGTGTGACATTCTTGGAGCCTCATCCCAAACTAGATAACGAGGTCTACTGGGTTGGTGAGAAGTTGCCATTTGTTTGTGGGTCATTTAGAGCTGGTAAAACCACTATCAACTTGGGGATGTCTAGGTTCTCACATATGGTGAAGTGTGAGTATAGCACAAACGGGTTTTCTTATGGAATATATCCAAAGAAAGGCGAAATTTGGGCAATGTACAGAAACTGGAACAGCAAATGGAAGCAATCTGACTTAAGTTATTACCAGTGTTGTATTGTTGAGATTGTTACAGATTTCTCTGAGGAATCTGGGTTGATGGCAGCCCGCTTAGTTGAGGTCCCAGGTTACACAACTTTCTTTAAGAGACAGGTGTTTGATGGGTTTGAGATGATCCGAACCATTCCAAGAGCAGAAATGCTCAGTTTTTCTCACCGGATAGCAGCATTTACTGTTCCGGGAGTTGAAATCCATGGTATTCCTGAAGACTCTTGGCACCTGGAGCCTGATGCATTGCCTCCCAATCTCAGCAACGAGTTAAAGCTTCAAAGGAGGTCATCTTAG 2259 0.4166 MDDIMGKALKEIEVVKMMIANEDYMGARTKLHELRHHFPALDGISGMITVCDILSSAGYGFLGCGTNWYWVLQIMRAAGEADIRYQFHKFKRLLDPIKTSFPGTESALKMIQDAFSVLSDPEKRAVFDLDLDSTLECGFVGENLVHKEDIAQISVRCSKSVCDTSDGINEESNSKECSLKRIINQDLLGKMDLHNAGMPTQAELINGVYDLIEERDVHDPEIPAQIEVTNGIHADDEQRKVTCTQERSMISACVKRRITVGTEKTANSMSSSVVSDFFYNFEYIRKPQLFTVGQVWATYDDENMPRKYARINSIYKFPFRLHISWLIPAPVTAHERRWCEVGLPVVCGFFNVDRNETVVTEPKKFSHMINCFASPNEQLQIYPQNGDIWAMYKDWKPFEWCSNPEARKGCILRMVEIIAGCSNPTGVMAAGLVKVEWFKNVFQRFTNNGNEYSFPIPAKNFFVFSHKVPAFRFTGGEMDRISNGMLELDPLAVPDVLDCIMAKPVEGSSSGSPTFLHSCPIPPVPESLNWKWSANNFASNQIWAVYVGPDSMPRKYVVVNNVVSGSEVCVTFLEPHPKLDNEVYWVGEKLPFVCGSFRAGKTTINLGMSRFSHMVKCEYSTNGFSYGIYPKKGEIWAMYRNWNSKWKQSDLSYYQCCIVEIVTDFSEESGLMAARLVEVPGYTTFFKRQVFDGFEMIRTIPRAEMLSFSHRIAAFTVPGVEIHGIPEDSWHLEPDALPPNLSNELKLQRRSS* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1326 752 Pfam Domain of unknown function (DUF3444) 275 476 IPR024593 -
Vvi14g1326 752 Pfam Domain of unknown function (DUF3444) 533 719 IPR024593 -
Vvi14g1326 752 SUPERFAMILY Chaperone J-domain 63 131 IPR036869 -
Vvi14g1326 752 Gene3D DnaJ domain 64 138 IPR036869 -
Vvi14g1326 752 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Vvi14g1326 752 PANTHER ENDOSOME ANTIGEN-LIKE PROTEIN, PUTATIVE (DUF3444)-RELATED 174 742 - -
Vvi14g1326 752 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1326 Vvi-Chr14 24933422 24935740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1326 7 132 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.771 1.38e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1326 - - vvi:104881643 1541.94