Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1261 ATGTCTGCAAAGCTTCTACATACCTTGTCAGACGAAAACCCAGATCTGCAGAAGCAGATTGGGTGCATGAATGGAATCTTTCAGCTCTTTGACCGCCACCATTTCCTCGGCGGCCGACGCATCAATGGCCATACCCACAAGAGGCTTCCTCCAGGGCAAGGAATGGAGCCAAACAATGCACCACATAAAGCTAAAGATAAAAATCCTAAGAAATTTGTGAAAGAGAAGCAGAGAATCTCGACTGAATCGTCCAGGACATCCTTTTCGTCTTCCTCCTGTTCGTCTACCTTCTCGTCTGTTGATTGTAATAGAACAGCTCAAACAGAATCCTTTTCCCACAGCCAAACCGGTTTCCCCAACACCCCTTCGCGAGACTTGCCCATGACCCAGCCAGATGCTTCTCCTCGGTTGGGCAGGCAATCGCTTGATCTCCGAGACATTGTAAAGGACTCAATCTACAGAGAGGCCTGTGGGCCTATGCGGCTGTCCAAGGAGCCAATTAAAGTTCCTGTTCTTGATGAATCACTTAGAACTTTTGGCAAGCTTCGTGGACCACCCAGGAACTCCAATGAAAGAAAGGATGGTTCCCTGGTTTTGACACCAAGGGATGCTCCCCGGTTCTCTTACGATGGAAGGGAATCACGAGACACATTCAAATCCGCTATAAAGCTCAAAGACCTCCCGAGGCTATCACTGGACAGTAGAGAGAGTTCCATGAGGGGTTCTGCCTCTGAACTAAAATCAAATTATCTGTTGAGGGATTTGCAGAAGGGAAATGGTAACTCCAGCAAAATGCTGAGCCCACAGCAAGAACCAGGAAGCAATAAAAGGCCATCTGGCGTTGTAGCGAAGTTGATGGGGCTAGATGCTTTCCCAGATTCTTCTATGTCAATCAATGATGGCCAGATGGAAGCCTGCCCAGATGGAGACACTAACCCCTTCTCAAGATCATCAAAAGCAGCTGGAGAAAGCAAGCAGCATCGAATTTCTGGGTCCCCAAGGAATTCCCACAAGGACCCGGTTTCACCTCGGTTGAGAAATGCTGGTTCAGTTATGAAGCCCACCTCAACTTCAAGGTTTCCCATAGAACCAGCTCCATGGAAGCAACTGGATGGAAGTCAAGGCCCTCAAAAACCAACCTTCAAGCATCGAGAAGCTGCCACAAAGACCCTGAATTCCACCCCTTCAATCTATGGTGAAATTGAGAAAAGATTGACTGAACTCGAGTTCAAAAAATCTGGTAAGGATCTCAGAGCTCTTAAACGAATACTTGAAGCAATGCAGAAGACTAAAGAGACGATAGAGGCCAAAAAAGATCATAATTCAAATTCTGTGTCTCAAACAAGCAACAGTTTGGGTTGCAGCAGTCCTGTTCGGAGTTCAAAAGTAGCAAATTCTCGCAACTTACAAAGTAACAGTCCAATGTCTGCCACAATCAGAGGGACTAGCTCTCCAACTAGCTTTAAATCTCCAATTGTGATCATGAAACCAGCCAAACTTATTGAGAAATCCCATAACCTGGCTTCCTCCGCAATCCCCATTGATGGTTTATCAGGTCTTCCAAGACTCCAAACTGGTGACTTAGTAGGTAGCAGAAAGGATTCAGTTGACAAGCAAACAGCTAAAGATCTGACCCCAAGAAACAAGCATCTTAAAGAGCCTTCAAGCCAACCCTCTCGTTTACTGGATAAGAGCTCCGCTGACAGAAGTTCAAGATTGACAAAGACTTCAAAAGTTCATCAAAAAATTAATGAAGAAAACACAAGCAGCTCAGGAAGGAACTCTGGAGCTGTGAGCCCTAGACTGCAACAGAAGAAGCTCGAGTTGGACAAGCAATCTCGTTCTACAACTCCATCACCGGAGTCCAGCAGGGTCAGGAGGCAATCCAGTAGGCAACTGACAGAACCAAGCTCTCCTGCTAGAAAACTCAGACAAAGAGCTCCCAATTTGCTGCAAAGTGATGACCAATTGAGTGAAATCAGTGGTGACTCTAGAAATTTGAGTTACCAAGTCACAAGCATTGATAGATCTGGTGGGATAAATAGCATCTCCTTCCAGCATGGTGGCCAGAAGCATAAAAATGGAGATGGTACAATGACAAAATTCGCAACAGCTACACAAGAACAACCAAGTCCTGTCTCTGTTCTGGATGCTGCATTCTACAAAGATGACTTGCCATCTCCAGTGAAGAAGATATCAAACGCTTTCAAAGATGATGAAACTCTGAATTATGATGAGATGGAGTGGGCTACAAAGTTGGAAAACATAGAAAACTTGGTTCAGAGGATTAGGGAACTAAACTCCACTCACAATGAATTCAGTGTGGATCTCATTGCATCTCTCTGCGACAAGACAAATCCAGATCACAGATACATTTCTGAGATACTGTTAGCATCAGGTCTCCTCAGAGATTGCTCTGGCTTGATGATCACTAAGCTCCACCAATCCAGCCATCCCATCAACCCCAAACTATTTCTTGTCCTGGAACAAAACAGGGATGTTGCCAACATTTTAAATGATAAGTACAGCAGCCAAAACACTGCCCAGTCAAAACTCCAAAGAAAACTCATATTTGATGTAGTCAATGAAATCCTATTTCAGAAATTAGCTTTCACAGGTTCTTCCGAGCCTTGTTTCTTACCAAATAAGATAGTTAGGAGAAGCCAGAATGGACAGGAGCTCCTGAGGGAATTATGTTCAGAGATAGATCAGCTCCAAGGTAACAACTCAGACTGCAGCTTAGAGAACGAAGTCTCATGGGAAGATATCATGCATCGCTCAGCCAACCGGGCAGACTTTCATGGCGAGGTTTCAGGGATAGCATTAGATGTTGAGCGCTTAATCTTTAAAGACTTGATTGGCGAGGTTCTGAATGGCGAGGCAGCTCTATCACGAGCCCGGCCTAGAGGGCATCATTACAGGCAACTGTTTCCTAAGTAA 2940 0.451 MSAKLLHTLSDENPDLQKQIGCMNGIFQLFDRHHFLGGRRINGHTHKRLPPGQGMEPNNAPHKAKDKNPKKFVKEKQRISTESSRTSFSSSSCSSTFSSVDCNRTAQTESFSHSQTGFPNTPSRDLPMTQPDASPRLGRQSLDLRDIVKDSIYREACGPMRLSKEPIKVPVLDESLRTFGKLRGPPRNSNERKDGSLVLTPRDAPRFSYDGRESRDTFKSAIKLKDLPRLSLDSRESSMRGSASELKSNYLLRDLQKGNGNSSKMLSPQQEPGSNKRPSGVVAKLMGLDAFPDSSMSINDGQMEACPDGDTNPFSRSSKAAGESKQHRISGSPRNSHKDPVSPRLRNAGSVMKPTSTSRFPIEPAPWKQLDGSQGPQKPTFKHREAATKTLNSTPSIYGEIEKRLTELEFKKSGKDLRALKRILEAMQKTKETIEAKKDHNSNSVSQTSNSLGCSSPVRSSKVANSRNLQSNSPMSATIRGTSSPTSFKSPIVIMKPAKLIEKSHNLASSAIPIDGLSGLPRLQTGDLVGSRKDSVDKQTAKDLTPRNKHLKEPSSQPSRLLDKSSADRSSRLTKTSKVHQKINEENTSSSGRNSGAVSPRLQQKKLELDKQSRSTTPSPESSRVRRQSSRQLTEPSSPARKLRQRAPNLLQSDDQLSEISGDSRNLSYQVTSIDRSGGINSISFQHGGQKHKNGDGTMTKFATATQEQPSPVSVLDAAFYKDDLPSPVKKISNAFKDDETLNYDEMEWATKLENIENLVQRIRELNSTHNEFSVDLIASLCDKTNPDHRYISEILLASGLLRDCSGLMITKLHQSSHPINPKLFLVLEQNRDVANILNDKYSSQNTAQSKLQRKLIFDVVNEILFQKLAFTGSSEPCFLPNKIVRRSQNGQELLRELCSEIDQLQGNNSDCSLENEVSWEDIMHRSANRADFHGEVSGIALDVERLIFKDLIGEVLNGEAALSRARPRGHHYRQLFPK* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1261 979 MobiDBLite consensus disorder prediction 583 601 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 565 582 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 433 490 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 41 141 - -
Vvi14g1261 979 Pfam DUF761-associated sequence motif 277 296 IPR032795 -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 649 664 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 293 393 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 311 329 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 531 557 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 82 128 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 254 276 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 525 664 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 440 490 - -
Vvi14g1261 979 PANTHER LONGIFOLIA PROTEIN 1 977 IPR033334 GO:0051513
Vvi14g1261 979 Pfam Domain of unknown function (DUF4378) 788 955 IPR025486 -
Vvi14g1261 979 Coils Coil 417 437 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 613 639 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 179 215 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 233 280 - -
Vvi14g1261 979 MobiDBLite consensus disorder prediction 60 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1261 Vvi-Chr14 24075902 24080124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1261 128 977 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 39.365 8.13e-152 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1261 - - vvi:100266999 1851.25