Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1259 ATGACTACAAGTTCAAGAGAAGCAGATTTTTCAGCAAAACTGGAAGGCGATGAAAGCGATGCCAGGATCGCTAAGAATTCATCTACTTCAACACCATGGCTAAGGTTAAAGGATCCACGAATTGTGCGTGTCTCTCGTGCTTATGGAGGAAAAGACAGGCATAGCAAGGTTTGCACTGTAAGAGGATTGAGAGACAGGCGAGTGAGACTTTCTGTACCGACTGCTATTCAATTGTATGATCTTCAAGATAGGCTTGGGCTTAATCAGCCTAGCAAGGTTGTTGATTGGTTGCTTAATGCAGCTAAGCATGAAATCGATGAACTCCCTCCACTCCAAATGCCGCCTGGGAACTTTGTCCAAAGTCATCAACCAATGATAACTTCTCTTGAAGTAGGTGCCTCTCAATTCAACAAGGAAGAACTGAAGATCAGTAATGGTATTGATTGGGAAGATCCAAGTGGATTACCTAGATCAAGTTTTTGGGGCTCCAATGCATTTCTGAGGGCTAAGTCAAAGGAAGTTCCAAGAGAAAATGTCAATGAAAAAGTAAATTGGATGAAGAGGAATGAGGAAGGTGGACAAGTTTCATCAAACATATTTCCTCCCAGAACCAATCAATCTTCCTTGCCAGGCTTGCTGAGCAGTTCCATGCCTTATGGTCCTTACTATCATTTGGAGCCTTCGAATCTTTCTCTTTCCACTTTAGGAAGCCATGGATTGACATCCCAAACAGAAGATCTCCACAACTTCAGTGTTGTACCCCTGCCATCTTCATTGTCCCTAACATCTGGTTCTCAAGTTTTGGTTTGTCCACCCGGAGCAACACAGTCCTATTTTCCTCCACATGTTCCCACTTCAATGGAGTTTGATCCAAGACAAATCAACCATTTTCAGTTGTTAAGCTCAAGTTCACAAAATATCTTGCCAAATGCTCTTACACCTCCTCTTTATTCCATAGGCCAACCTGTGAGACCCTTGCATTTGAGTATGGCTCATAAAATTCACCATTCTCAAAGCATCAATGGAGGTCATCCAAATAAGGACAGTTAA 1050 0.4248 MTTSSREADFSAKLEGDESDARIAKNSSTSTPWLRLKDPRIVRVSRAYGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLQMPPGNFVQSHQPMITSLEVGASQFNKEELKISNGIDWEDPSGLPRSSFWGSNAFLRAKSKEVPRENVNEKVNWMKRNEEGGQVSSNIFPPRTNQSSLPGLLSSSMPYGPYYHLEPSNLSLSTLGSHGLTSQTEDLHNFSVVPLPSSLSLTSGSQVLVCPPGATQSYFPPHVPTSMEFDPRQINHFQLLSSSSQNILPNALTPPLYSIGQPVRPLHLSMAHKIHHSQSINGGHPNKDS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1259 349 ProSiteProfiles TCP domain profile. 50 108 IPR017887 -
Vvi14g1259 349 MobiDBLite consensus disorder prediction 1 26 - -
Vvi14g1259 349 Pfam TCP family transcription factor 50 137 IPR017887 -
Vvi14g1259 349 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 286 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1259 Vvi-Chr14 24046932 24047981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1259 33 299 TCP Transcription Factor Family AT3G02150 42.086 2.50e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vvi14g1259 TCP 1.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1259 - - vvi:100263410 679.093