Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1250 ATGGGGGATTGTAAATCTGTAGCTCCGGGGTTGGAAGGGGAGGAAAACTTGATTGCTGCAGCACAGCACATAGTGAAGGCGTTGGGGTCTAATAAGAACCTTACTGATGATGTGAGGAAGATTTTGGTGGATCTTGGTACCCAGTTGTCGACCATAACCATAGCCGATGAAAACAAGAGTGAGGGGGTAAATGAAATTGAAGACCGGCTTGTTGCTGCACAGGACAAGGTGATGAGTTGGGAAGCTGATCAGTGTATGGTATGGGATTCAGGCCCTGAGGAAGCTGCTGAGTATCTGAAGGCTGTTGAGGAAGTGAGAAAATTGACGGAAGTCTTGGAAAGCTTGTGTTTGAACAAAGATAGTGAAGGGGATGAGCTCCTACGGAGAGCTTATGATGTTTTACAGACAGCAATGGCAAGGCTTGAGGAAGAGTTCAGATACTTGCTTTTTCAGAATCGGCAACCCTTTGAGCCTGAACACATGTCTTTTCGTTCTAATGATGAGGATGTGGTGGACGAGGGCTCAATCATATCTTTTGAGGATGACCCAGTTGAGGACTCCCTTCAGACTGATAGTATTAGCAGAAGTTCTGAGGACTACATCATTCACTTGGTCCATCCAGAAGTGATTCCTGACCTCAAATCCATAGCAAATTTAATGTTAAGTTCAAATTATGATCAGGAATGCTCTCAGGCCTATATAAGTGTCCGCAAGGATGCCTTGGATGAGTGCCTCTCCATTCTTGAAATGGAGAAGTTGAGCATTGAGGATGTCCTTAAGATGGAGTGGGCAGGCTTGAATTCCAAGATTAGGAGATGGGTTCGGGCTATGAAGATATTTGTGCGCGTCTATCTTGCTAGCGAGAAATGGCTAAGTGACCAAGTTTTTGGGGAGGTTGGATCAGTTAGTTCAGCTTGTTTTGTGGAGGCATCACGGGCTTCAATTTTTCAGCTGCTGAATTTTGGTGAGGCCATAGTTATTGGTCCCCACAAACCAGAAAAATTGATGCGCATACTCGACATGTATGAGGTGCTAGCAGATCTTCTTCCAGATATTGATGGTATATACCAGGAGGATATAGGTTCTTCTGTTAGAACCGAGTGTCGTGAGGTTCTAGGGGGATTGGGTGACTGTGTGAGGGCAACCTTTCTTGAATTTGAGAATGCCATTGCATCAAACACATCAACAAATCCTTTTGCAGGGGGTGGAATCCACCCACTGACTAGGTATGTCATGAACTACATCAAGATTCTTACCGATTACAGTAATACCATTAATTTGCTATTCGAGGACCATGACAGAGCAGATCCTGGTTCATTGTCATCCAACACAAGTCCAGTTACAGAAGAGGAGAACAAAAGTGGAAGCTCTTCTTGCAGTACTCCAACGGGTCTCCACTTCCGGGCACTGATTTCAGTTCTTGAATGCAACCTTGAGGATAAGTCCAAGTTGTACAGGGATGTTGCTTTACAACACCTGTTCTTGATGAACAACATTCACTACATGACTGAAAAGGTTAAGAATTCTGAACTCAGGGATGTTTTTGGGGATGAATGGATTCGCAAGCATAACTGGAAATTCCAACAGCATGCAATGAACTATGAGAGAGCTTCTTGGAGTTCAATCTTGCTTTTACTCAAGGAGGAAGGGATTCAGAACTCCAATTCGAATTCTCCATCGAAAACTGTTTTGAAGGATAGGCTCCGGAGCTTTAATGTTGCTTTTGAGGAGCTCTACAAATCCCAGACAGCATGGCTGATCCCAGACAGTCAGCTTCGAGACGAGTTACAAATCTCAACGTCCCTCAAAGTAGTCCAGGCTTATCGGACATTTGTGGGAAGACATAACCCTCATATCAGTGACAAGCACATAAAGTACAGTCCTGATGATCTACAGAACTTCCTCTTGGATCTCTTTGAGGGATCTCCAAAATCACTGCCAAATACCCACAGGAGGTGA 1959 0.4436 MGDCKSVAPGLEGEENLIAAAQHIVKALGSNKNLTDDVRKILVDLGTQLSTITIADENKSEGVNEIEDRLVAAQDKVMSWEADQCMVWDSGPEEAAEYLKAVEEVRKLTEVLESLCLNKDSEGDELLRRAYDVLQTAMARLEEEFRYLLFQNRQPFEPEHMSFRSNDEDVVDEGSIISFEDDPVEDSLQTDSISRSSEDYIIHLVHPEVIPDLKSIANLMLSSNYDQECSQAYISVRKDALDECLSILEMEKLSIEDVLKMEWAGLNSKIRRWVRAMKIFVRVYLASEKWLSDQVFGEVGSVSSACFVEASRASIFQLLNFGEAIVIGPHKPEKLMRILDMYEVLADLLPDIDGIYQEDIGSSVRTECREVLGGLGDCVRATFLEFENAIASNTSTNPFAGGGIHPLTRYVMNYIKILTDYSNTINLLFEDHDRADPGSLSSNTSPVTEEENKSGSSSCSTPTGLHFRALISVLECNLEDKSKLYRDVALQHLFLMNNIHYMTEKVKNSELRDVFGDEWIRKHNWKFQQHAMNYERASWSSILLLLKEEGIQNSNSNSPSKTVLKDRLRSFNVAFEELYKSQTAWLIPDSQLRDELQISTSLKVVQAYRTFVGRHNPHISDKHIKYSPDDLQNFLLDLFEGSPKSLPNTHRR* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1250 652 SUPERFAMILY Cullin repeat-like 84 640 IPR016159 -
Vvi14g1250 652 MobiDBLite consensus disorder prediction 438 461 - -
Vvi14g1250 652 Coils Coil 63 83 - -
Vvi14g1250 652 Gene3D Exocyst complex component Exo70 79 649 - -
Vvi14g1250 652 MobiDBLite consensus disorder prediction 437 461 - -
Vvi14g1250 652 Pfam Exo70 exocyst complex subunit 272 636 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi14g1250 652 Coils Coil 124 144 - -
Vvi14g1250 652 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 641 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1250 Vvi-Chr14 23967748 23969706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1250 11 652 EXO70 exocyst subunit family AT3G29400 48.260 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1250 K07195 - vvi:100261660 1297.34