Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1237 ATGAGAAATACCAGCTACAAACGCCTTTCTCCAAACGTCCTTTCATTTATTATCCCTCTTTATCTCCTCGTCCTCCACTTCTTTCCGATCCCTATCACCGGTGACTCCCCACCTCTCTACAATCCTACTGATATCTATACCGTTGACTGTGGTGCGTCCGGGAATTTAAAAGCATGGGATAACCGAATCTGGATCGGAGACACCAATTCCCGATTCTCCCTCATAGAAAAAAACAAGGCGTCTATAATCTCAAAGGCAGCTAAGACATCCCCCTCAGTTGATCCCGTCCCCTTCGCCACCGCACGACTATCTCGCTTCCAATTCGCTTACATATTTCCTGTCACAACCGGCCAGAAATTCATTCGCTTGCACTTCTATCCATCTTCCGTTGCGGGCTTTGATAGATCAAAGGCTTTTTTCTCAGTTAAGATCGGTGGCTATACACTTCTTAACAACTTCAGTGCTGCACTCGCTGCTGATGCCCATGGGGATGAAACCGTATCGAAAGAATTCTGTGTCAATGTCAAACAAGGAGATCAGATGCTGAACATAACATTCACTCCAACGGCCAGTGATCCAGATGCATACGCTTTTATTAACGGAATTGAAATTGTCTCCATGCCCGACTATCTCTACTATACTTCCCCACAAAATGGAGGGATTCAGTTTATCGGCCAAAAAAATGTATTTTGGATTGAAATCGAGTATGCTCTGGAAATGGTATACCGACTGAACGTGGGTGGGAGATTTGTTTCACCCATGGAAGACACAGGCATGTTCCGCACTTGGGATGAGGATGATGATTATTGCGTGAAACTAGCATTTGTACCGGCCAACAGCAGTATTGATCTCAAGTTTACTCAACAACCGGAATACACGGCACCGCCTGATGTCTACCGCACCGCCCGGACGATGGGGAACAACAAGACTGAGAACATGGGATACAATCTTACTTGGGTGTTATCTGTGGACTCTGGTTTTAACTATCTGCTTAGACTACACTTTTGCGAGTTCCAACCCGAGATAACGGAGCGGCAAGACAGGGAGTTCACTATTTTTATAGCTAACCAGACGGCGGAGAATCATGCAGACGTGATCACATGGAGCGGCGGAAACGGAGTTCCCATATACAGAGATTATGCGGTCATGATGCCAAGCCAGGGAAGCAACAAAAAACAAAACCTCTACATACAACTGCATCCTAACCCGGACTGGAGAACCCGTTACAATGATGCAATTCTGAATGGAATCGAGCTCTTCAAAGTCAGCAAGTTTGATAACAGCCTGGCCGGACCAAATCCAGACCCGCCTCCTAATTCGGTTCCCCCACCGCCTGCACAGTCTACCTCGCCGAAGGATTATGACACACAGCTTGTAGCAATTGTCTGCGGCATGGTTGCCTGCATAGTTGCACTCTCTACTCTATGTTTATTCATTCGCCGGCGAGGAGGGAGACGGCGAGACGCCGACCCAGGAGCATCGTGGTGGGCGCGGCTATCTCGCAATGAGTTCACATACTCATTTCCCCTCACAGCCGGCCAGAAATACATTCGCTTGCACTTTTATCCATCTTCATACGGGGAGTTCGACAGATCTAAAGCTTTTTTCTCGGTCAAAACCGGTGGTGGCTACACTCTTCTTAGCAACTTCAGTAATTCATTTTTCGTTGAAACAGATCATGCTCTGGAAAATGTATACCGACTAAACGTAGGTGGGAAATCTCTTTCGCCCACGGATGACACCGGCATGTTCCGTACTTGGGATGCGGACGATGAATACTGTGTGAAACTAGCATTTGTACCCGCCAACACCAGCATTAATCTCAAATTCACCCAAATACCAAATTACACGGCACCTCTTGATGTCTACCGCACCGCCCGGACCATGGGAAACAACAAAACTGAGAACATGGGATACAATCTGACTTGGTTTTTGCCTGTGGACTCTGGTTTTAGTTACCTGCTTAGATTACATTTTTGCGAGTTCCAACCAGAGATCCAGGAGCAGCACGACAGGGAGTTCGCGATTATCATAGCCAACCAGACGGCGGAGAATCATGCAGACGTGATCACATGGAGCACGGGAAATGGAGTTCCCATATACAAAGATTATGGGGTAATGATGCCAAGCCAGGGAAGTAACAAAAAACAAAACCTCTACATACAACTGCATCCTAACCCGGATTCTGAAACCGTTTACAATGATGCAATCCTCAACGGAATCGAGCTATTCAAACTCAGCAATCCTGAAAAAAGCCTCGCCGGGCCCAATCCAGATCCATCGGAGGCTCCTGCCCCACCACCGCCTGTACAGTCTACCTCGCCCAAGAGAAACAAAACAAAGCTTATCGCAATTGCCGGTAGCGTGGTCGCAGGCCTAATCGCGCTCTCTGTTATAGTTCTCTTTATTGTCTGGCGAGGAAGGAGAGTAAGAGACTCCGAACCCAGCGATGGAGGATCATGGTGGGGCCAATTTTCTTATACCTCGGTGAAGTCCACGAAGACCAGCCGCTCATCTCTGCCCTCCGATCTGTGCCGTCACTTCACTCTGCAAGAAGTCAAGGTGGCCACTAACAACTTCGACCAAGTCTTCATCATCGGCGTCGGAGGCTTTGGGAACGTGTACAAAGGGTATATCAACGGCGGAACAACACCGGTGGCAATCAAACGGTTGAATCCAGAGTCACAGCAGGGGGCCCAGGAATTCCAGACTGAGATCGAGATGCTTTCCCAGCTCCGCCACCTTCATCTGGTATCTCTAATTGGCTACTGCAACGACGATCGCGAGATGATCCTCGTGTACGATTACATGGCCCACGGCACTCTCCGCGATCATCTCTACAAAACAGATAATCCTCCATTGTCGTGGAAGCAGAGGCTCGAGATTTGCATTGGCGCAGCTCGAGGGTTGCACTATCTTCATACAGGTGTGAAGCACACGATCATTCACCGGGATGTGAAGACAACCAACATCCTTTTGGATGAGAAATGGGTGGCCAAAGTTTCGGATTTCGGATTGTCAAAGATGGGCCCTACCAGCATGTCGAACGCCCACGTCAGCACAGTGGTGAAGGGTAGTTTCGGGTATTTGGACCCAGAGTATTACCGGCGGCAACAGCTAACGGAGAAATCCGACGTGTACTCATTCGGTGTAGTACTGTTTGAAGTACTGTGCGCGAGGCCACCCCTGAATCAGACGGTGGAGAAAGAGCGGGTCAGTCTAGCACAGTGGGCCCCGGCCTGCTATCGAGATGGGAAGCTCGAACAGATCGTTGATCCGTTTTTAAAGGGTAAGATAGCGCCGGACTGTCTGCAGAAGTTTGGGGAGATCGCAGTGAGTTGTTTGCAGGATCAGGGGATCGAACGGCCATCCATGAGCGATGTGGTGTGGGGCCTTCAATTTGCAATGCAGCTACAGGAGAGCGCGGAGCAGGAGATGGAGAAGAGTGGGTCGTGGAGAAAAGTGAAGGACGAAGAAGCCCCACTGAAGGCCTCCATTACTGATGATAGTGACGATGCGTACGTGTTAACTAGTGATAGTGGAGGCACGTGGGATTCGAAGAGTAGTGGGGTAATGATACAATCTAGTGGAGAAGAAAAAAGTTCAACCAGTTGTGAATCTGATGCGCTGATGTCAGGTGCCGTGTTCTCTGAGATCCTGAACCCAAAGGGGCGATGA 3678 0.4905 MRNTSYKRLSPNVLSFIIPLYLLVLHFFPIPITGDSPPLYNPTDIYTVDCGASGNLKAWDNRIWIGDTNSRFSLIEKNKASIISKAAKTSPSVDPVPFATARLSRFQFAYIFPVTTGQKFIRLHFYPSSVAGFDRSKAFFSVKIGGYTLLNNFSAALAADAHGDETVSKEFCVNVKQGDQMLNITFTPTASDPDAYAFINGIEIVSMPDYLYYTSPQNGGIQFIGQKNVFWIEIEYALEMVYRLNVGGRFVSPMEDTGMFRTWDEDDDYCVKLAFVPANSSIDLKFTQQPEYTAPPDVYRTARTMGNNKTENMGYNLTWVLSVDSGFNYLLRLHFCEFQPEITERQDREFTIFIANQTAENHADVITWSGGNGVPIYRDYAVMMPSQGSNKKQNLYIQLHPNPDWRTRYNDAILNGIELFKVSKFDNSLAGPNPDPPPNSVPPPPAQSTSPKDYDTQLVAIVCGMVACIVALSTLCLFIRRRGGRRRDADPGASWWARLSRNEFTYSFPLTAGQKYIRLHFYPSSYGEFDRSKAFFSVKTGGGYTLLSNFSNSFFVETDHALENVYRLNVGGKSLSPTDDTGMFRTWDADDEYCVKLAFVPANTSINLKFTQIPNYTAPLDVYRTARTMGNNKTENMGYNLTWFLPVDSGFSYLLRLHFCEFQPEIQEQHDREFAIIIANQTAENHADVITWSTGNGVPIYKDYGVMMPSQGSNKKQNLYIQLHPNPDSETVYNDAILNGIELFKLSNPEKSLAGPNPDPSEAPAPPPPVQSTSPKRNKTKLIAIAGSVVAGLIALSVIVLFIVWRGRRVRDSEPSDGGSWWGQFSYTSVKSTKTSRSSLPSDLCRHFTLQEVKVATNNFDQVFIIGVGGFGNVYKGYINGGTTPVAIKRLNPESQQGAQEFQTEIEMLSQLRHLHLVSLIGYCNDDREMILVYDYMAHGTLRDHLYKTDNPPLSWKQRLEICIGAARGLHYLHTGVKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKMGPTSMSNAHVSTVVKGSFGYLDPEYYRRQQLTEKSDVYSFGVVLFEVLCARPPLNQTVEKERVSLAQWAPACYRDGKLEQIVDPFLKGKIAPDCLQKFGEIAVSCLQDQGIERPSMSDVVWGLQFAMQLQESAEQEMEKSGSWRKVKDEEAPLKASITDDSDDAYVLTSDSGGTWDSKSSGVMIQSSGEEKSSTSCESDALMSGAVFSEILNPKGR* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1237 1225 Gene3D - 488 561 - -
Vvi14g1237 1225 Gene3D - 43 207 - -
Vvi14g1237 1225 Gene3D - 236 424 - -
Vvi14g1237 1225 Gene3D - 562 747 - -
Vvi14g1237 1225 FunFam Receptor-like protein kinase FERONIA 937 1154 - -
Vvi14g1237 1225 FunFam FERONIA receptor-like kinase 45 208 - -
Vvi14g1237 1225 MobiDBLite consensus disorder prediction 1178 1206 - -
Vvi14g1237 1225 ProSitePatterns Protein kinases ATP-binding region signature. 866 889 IPR017441 GO:0005524
Vvi14g1237 1225 Gene3D Transferase(Phosphotransferase) domain 1 937 1159 - -
Vvi14g1237 1225 FunFam Receptor-like protein kinase FERONIA 832 936 - -
Vvi14g1237 1225 Pfam Protein tyrosine and serine/threonine kinase 866 1129 IPR001245 GO:0004672|GO:0006468
Vvi14g1237 1225 MobiDBLite consensus disorder prediction 428 452 - -
Vvi14g1237 1225 ProSiteProfiles Protein kinase domain profile. 860 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1237 1225 FunFam FERONIA receptor-like kinase 560 747 - -
Vvi14g1237 1225 Pfam Malectin-like domain 48 422 IPR024788 -
Vvi14g1237 1225 Pfam Malectin-like domain 551 745 IPR024788 -
Vvi14g1237 1225 Gene3D Phosphorylase Kinase; domain 1 823 936 - -
Vvi14g1237 1225 FunFam FERONIA receptor-like kinase 236 423 - -
Vvi14g1237 1225 CDD TM_EGFR-like 781 809 - -
Vvi14g1237 1225 CDD STKc_IRAK 866 1129 - -
Vvi14g1237 1225 MobiDBLite consensus disorder prediction 759 773 - -
Vvi14g1237 1225 ProSitePatterns Serine/Threonine protein kinases active-site signature. 981 993 IPR008271 GO:0004672|GO:0006468
Vvi14g1237 1225 MobiDBLite consensus disorder prediction 749 776 - -
Vvi14g1237 1225 PANTHER OS03G0124300 PROTEIN-RELATED 497 553 IPR046957 GO:0004672
Vvi14g1237 1225 SUPERFAMILY Protein kinase-like (PK-like) 834 1134 IPR011009 -
Vvi14g1237 1225 MobiDBLite consensus disorder prediction 431 449 - -
Vvi14g1237 1225 SMART serkin_6 860 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1237 Vvi-Chr14 23807107 23816230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1237 497 578 Receptor kinase-like Gene Family AT3G51550 42.857 4.46e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vvi14g1237 Malectin_like 3.7e-62 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1237 - - vvi:100241219 1254.2