Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1235 ATGAGGAATACTGGCAACAGATGCCTCTGTTTAATCATTCCATCCATTCTCACCCCTGTCTATCTCTTTATCTTCCTCCACTACCTCACCATCCCCATCGCTGGTTACAATTACAACCCTACAGAAAACTTCGCCATCAATTGTGGCTCCAGCGGAAATTCACAAGAATTGGGCAGGAACTGGATGGGCGACATTGATTCCAAATTTTCCCCCTTGGAAAACGGCACGTCAACAACATCTTCTGCGGATGAACCACCCTTTTTATCCGTTCCCTATTCCACAGCGCGGCTATCTCGCTATGAGTTCACATACTCATTTCCCCTCACAGCCGGCCAGAAATACATTCGCTTGCACTTTCATCCATCTTTATACGTGGGGGAGTTCGACAGGTCTACAGCTATTTTCTCGGTCAAAACTGGTGGTGGCTACACTCTTCTTAGCAACTTCAGTGGTGCCCTTGTTGCTGATTCTGATCTTGGTAAGGAAAAGATACTGAAAGAATTTTGTATCAACTTCAACGAAGAAGGTGAGAAGCTGAATATAACATTCGCTCCCACTGCGGGTGTAGATGCATACGCTTTTATTAACGGAATTGAAATTGTCTCCATGCCCGACAATCTCTACTACACTGCACAAGATGGAGGGTTTAAGTTTATCGGTCAACAGAATTCATTTTTCGTTGAAACCGATCATGCTCTGGAAAATTTATACCGACTAAACGTAGGTGGGAAATCTCTTTTGCCCATGGATGACACCGGCATGTTCCGTACTTGGGATGCAGACTATGAGTATCTTCCGAAACTAGCATTTGTACCCGTCAACGGAAGCATTACTCTCAAATTCACCCAAATACCAAATTACGCGGCACCTCTTGATGTCTACCGCACCGCCCGGACCATGGGAAACAACAAAACTGAGAACATGGGATACAATCTTACTTGGTCTTTGCCTGTGGACTCTGGTTTTAGTTACCTGCTTAGATTACATTTTTGCGAGTTCCAACCAGAGATCCAGGAACAGCAGGACAGGGAGTTCACGATTTTCATAGCTAACCAGACGGCGGAGAATCATGCAGACGTGATCAAATGGAGCGGCGGAAACGGAGTTCCCATATACAGAGATTATGGGGTAATGATGCCAAGCCAGGGAAGTAACAAAAAACAAAAGCTCTACATACAACTGCATCCTAACCCGGATTATGAAACCGTTTACAATGATGCAATCCTCAACGGAATCGAGCTGTTCAAACTCATCAATCCCAATCCAGACCAACAGCCTACCTCGAGGGAAAGTAACAAAATGAAGCTTGTTGCAATTACCGGAGGTGTGGTTTGCGGCCTAGTTGCAGTCTCAGTTTTATATTTCTTTGTCGTGCATCAAATGAAGAGAAATAGAGATCCTAGCCTTAGAGACGGAGCACTATGGTGGGGCCCAGTTTTTTATATTTTGGGTACGTCCACCGAGACCCATCGCTCATCTCTAACATCCGATCTGAGCCATCATTTCAGTCTGCAAGATATCAAGACGGCCACCAAGAACTTTGACAAGGGATACATCGTCGGAGAGGGAGGCTTTGGTAACGTGTATAAAGGGTATATCAGTGGAGGAACCACACCGGTGGCAATCAAACGCCTAAATCCTGAGTCACAGCAGGGGGCCCACGAATTCATGACTGAGATCGAGATGCTTTCCCAGCTGCGTCACATTCATCTTGTGTCTCTCATTGGTTACTGCAACCATAAACGTGAGATGATCCTTGTGTACGAGTACATGGCCAATGGCAACCTCCGCGATCATCTCTACAACACTGATAATCCTCCTCTGCCGTGGACCCAACGCCTTCAGATTTGCATCGGAGCTGCGCGTGGACTGCACTACCTTCACGCCGGTGTGAAGAAGACAATCATTCACCGTGATGTCAAGACAACCAACATTTTATTGGATCATAAATGGGTGGCTAAAGTTTCCGACTTCGGCCTATCCAAAATGAGTCCTACCAGCGTGGCAAATGCCCACATCAGCACAGTTGTCAAGGGTAGTTTTGGCTATCTGGATCCAGAGTATTTCAGATTCCAACGTCTGAACGAGAAGTCTGACGTCTACTCATTTGGGGTGGTATTATTTGAAGTACTGTGTGCAAGGCCACCTGTAAATCAAACAGGGGAGGAAGAGCAAGCGGGCTTGGCACACTGGGCCGTCACCAGCTACAAAAATGGAAAGCTGGAGGAAATCATCGACCCCCATTTGGAGGGTAAGATTGCACCAATGTGCTTGGAGAAATACGGAGAGGTTGCAGTGAGTTGCGTGCTTGATCAAAGGATCAAGCGTCCGTCAATGAGCGATGTGGTGAGGGGCCTTGAGCTTGCATTGGAGCTCCAGGAAAGTACAGAAAAGGGGAACAGTATAAATGAGTCCCTGGACCATGAGGAGAGCCTATCACAAATTTCTGGTACAGATGACGACGACAAAGATGTGTTTCATAATGGAGGTAGAGACGTCTGCGATTCAGAGGCTAGCAGGGTGACAATCCCGAGCAATGATGAAAAAAGTTCAATTAGTGTTATGATGGAAGACGATGCATGTGTTCTCTGA 2592 0.4641 MRNTGNRCLCLIIPSILTPVYLFIFLHYLTIPIAGYNYNPTENFAINCGSSGNSQELGRNWMGDIDSKFSPLENGTSTTSSADEPPFLSVPYSTARLSRYEFTYSFPLTAGQKYIRLHFHPSLYVGEFDRSTAIFSVKTGGGYTLLSNFSGALVADSDLGKEKILKEFCINFNEEGEKLNITFAPTAGVDAYAFINGIEIVSMPDNLYYTAQDGGFKFIGQQNSFFVETDHALENLYRLNVGGKSLLPMDDTGMFRTWDADYEYLPKLAFVPVNGSITLKFTQIPNYAAPLDVYRTARTMGNNKTENMGYNLTWSLPVDSGFSYLLRLHFCEFQPEIQEQQDREFTIFIANQTAENHADVIKWSGGNGVPIYRDYGVMMPSQGSNKKQKLYIQLHPNPDYETVYNDAILNGIELFKLINPNPDQQPTSRESNKMKLVAITGGVVCGLVAVSVLYFFVVHQMKRNRDPSLRDGALWWGPVFYILGTSTETHRSSLTSDLSHHFSLQDIKTATKNFDKGYIVGEGGFGNVYKGYISGGTTPVAIKRLNPESQQGAHEFMTEIEMLSQLRHIHLVSLIGYCNHKREMILVYEYMANGNLRDHLYNTDNPPLPWTQRLQICIGAARGLHYLHAGVKKTIIHRDVKTTNILLDHKWVAKVSDFGLSKMSPTSVANAHISTVVKGSFGYLDPEYFRFQRLNEKSDVYSFGVVLFEVLCARPPVNQTGEEEQAGLAHWAVTSYKNGKLEEIIDPHLEGKIAPMCLEKYGEVAVSCVLDQRIKRPSMSDVVRGLELALELQESTEKGNSINESLDHEESLSQISGTDDDDKDVFHNGGRDVCDSEASRVTIPSNDEKSSISVMMEDDACVL* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1235 863 FunFam FERONIA receptor-like kinase 43 204 - -
Vvi14g1235 863 ProSitePatterns Protein kinases ATP-binding region signature. 520 543 IPR017441 GO:0005524
Vvi14g1235 863 FunFam receptor-like protein kinase FERONIA 482 590 - -
Vvi14g1235 863 SMART serkin_6 514 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1235 863 ProSiteProfiles Protein kinase domain profile. 514 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1235 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Vvi14g1235 863 PANTHER OS03G0124300 PROTEIN-RELATED 20 470 IPR046957 GO:0004672
Vvi14g1235 863 Gene3D Phosphorylase Kinase; domain 1 482 590 - -
Vvi14g1235 863 MobiDBLite consensus disorder prediction 797 812 - -
Vvi14g1235 863 FunFam Receptor-like protein kinase FERONIA 591 808 - -
Vvi14g1235 863 Gene3D - 42 204 - -
Vvi14g1235 863 Gene3D - 232 417 - -
Vvi14g1235 863 Pfam Malectin-like domain 46 416 IPR024788 -
Vvi14g1235 863 SUPERFAMILY Protein kinase-like (PK-like) 483 786 IPR011009 -
Vvi14g1235 863 FunFam FERONIA receptor-like kinase 231 418 - -
Vvi14g1235 863 Gene3D Transferase(Phosphotransferase) domain 1 591 812 - -
Vvi14g1235 863 Pfam Protein tyrosine and serine/threonine kinase 519 784 IPR001245 GO:0004672|GO:0006468
Vvi14g1235 863 MobiDBLite consensus disorder prediction 797 849 - -
Vvi14g1235 863 MobiDBLite consensus disorder prediction 813 834 - -
Vvi14g1235 863 CDD STKc_IRAK 520 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1235 Vvi-Chr14 23793482 23796073 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1235 33 843 Receptor kinase-like Gene Family AT3G51550 49.123 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vvi14g1235 Malectin_like 1.2e-49 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1235 - - vvi:109123910 1764.97