Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1233 ATGAGGAATACTGGCAACAGATGCCTCTGTTTAATCATTCCATCCATTCTCACCCCTGTCTATCTCTTTATCTTCCTCCACCACCTCACCATCCCCATCGCCGGTTACAGCCCTACAGAAAACTTCGCCATCAATTGTGGCTCCAGCGGAAATTCACAAGAATTGGGCAGGAACTGGATGGGCGACATTGATTCCAAATTTTCCCCCTTGGAAAACGGCACGTCAACAACATCTTCTGCGGATGAACCACCCTTTTTATCAGTTCCCTATTCCACAGCGCGGCTATCTCGCTATGAGTTCACATACTCATTTCCCCTCACAGCCGGCCAGAAATACATTCGCTTGCACTTTCATCCATCTTCATACGGGGGGGAGTTCGATAGGTCTACAGCTATTTTCTCGGTCAAAACTGGTGGTGGCTACACTCTTCTTAGCAACTTCAGTGGTGCCCTTGTTGCTGATTCTGATCTTGGTAGGGAAAAGATACTGAAAGAATTTTGTATCAACTTCAAGGAAGAAGGTGAGAAGCTGAATATAACATTCGCTCCCACTGCGGGTGAAGATGCATACGCTTTTATTAACGGAATTGAAATTGTCTCCATGCCCGACTATCTCTACTACACTTCTCCACAAGATGGAGGGTTTAAGTTTATTGGTCAACATAATTCATTTTTCGTTGAAACCGATCATGCTCTGGAAAATTTATACCGACTAAACGTAGGTGGGCAATCTCTTTCGCCCATGGATGACACCGGCATGTTCCGTACTTGGGATGCAGACGATGAGTATCTTCCGAAACTAGCATTTGTACCCGTCAACGGAAGCATTACTCTCAAATTCATCCAAATACCAAATTACACGGCACCTCTTGATGTCTACCGCACCGCCCGGACCATGGGAAACAACAAAACTGAGAACATGGGATACAATCTTACTTGGTCTTTGCCTGTGGACTCTGGTTTTAGTTACCTGCTTAGATTACATTTTTGCGAGTTCCAACCAGAGATCCAGCAGCAGCAGGACAGGGAGTTCACGATTTTCATAGCTAACCAGACGGCGGAGAATCATGCAGACGTGATCAAATGGAGCGGCGGAAACGGAGTTCCCATTTACAGAGATTATGGGGTAATGATGCCAAGCCAGGGAAGGAACAAAAAACAAAAGCTCTACATACAATTGCATCCTAACCCGGATTATGAAACCCTTTACAGTGATGCAATCCTCAACGGAATCGAGCTGTTCAAACTCATCAATCCCAATTCAGACCAACAGCCTACCTCGAGGGAAAGTAACAAAATGAAGCTTGTTGCAATTACCGGAGGTGTGGTTTGCGGTGTAGTTGCAGTCTCAGTTTTATATTTCTTTGTCGTGCATCAAATGAAGAGAAATAGAGATCCTAGCCTCAGAGACGGAGCACTATGGTGGGGCCCAGTTTTTTATATTTTGGGTACGTCCACCGAGACCCATCGCTCATCTCTAACATCCGATCTGAGCCATCATTTCAGTCTGCAAGATATCAAGACGGCCACCAAGAACTTTGACAAGGGATACATCGTCGGAGAGGGAGGCTTTGGTAACGTGTATAAAGGGTATATCAGTGGAGGAACCACACCGGTGGCAATCAAACGCCTAAATCCTGAGTCACAGCAGGGGGCCCACGAATTCATGACTGAGATCGAGATGCTTTCCCAGCTGCGTCACATTCATCTTGTGTCTCTCATTGGTTACTGCAACCATAAACGTGAGATGATCCTTGTGTACGAGTACATGGCCAATGGCAACCTCCGCGATCATCTCTAA 1800 0.46 MRNTGNRCLCLIIPSILTPVYLFIFLHHLTIPIAGYSPTENFAINCGSSGNSQELGRNWMGDIDSKFSPLENGTSTTSSADEPPFLSVPYSTARLSRYEFTYSFPLTAGQKYIRLHFHPSSYGGEFDRSTAIFSVKTGGGYTLLSNFSGALVADSDLGREKILKEFCINFKEEGEKLNITFAPTAGEDAYAFINGIEIVSMPDYLYYTSPQDGGFKFIGQHNSFFVETDHALENLYRLNVGGQSLSPMDDTGMFRTWDADDEYLPKLAFVPVNGSITLKFIQIPNYTAPLDVYRTARTMGNNKTENMGYNLTWSLPVDSGFSYLLRLHFCEFQPEIQQQQDREFTIFIANQTAENHADVIKWSGGNGVPIYRDYGVMMPSQGRNKKQKLYIQLHPNPDYETLYSDAILNGIELFKLINPNSDQQPTSRESNKMKLVAITGGVVCGVVAVSVLYFFVVHQMKRNRDPSLRDGALWWGPVFYILGTSTETHRSSLTSDLSHHFSLQDIKTATKNFDKGYIVGEGGFGNVYKGYISGGTTPVAIKRLNPESQQGAHEFMTEIEMLSQLRHIHLVSLIGYCNHKREMILVYEYMANGNLRDHL* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1233 599 Gene3D Phosphorylase Kinase; domain 1 481 589 - -
Vvi14g1233 599 ProSiteProfiles Protein kinase domain profile. 513 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1233 599 Pfam Protein tyrosine and serine/threonine kinase 518 599 IPR001245 GO:0004672|GO:0006468
Vvi14g1233 599 FunFam FERONIA receptor-like kinase 230 417 - -
Vvi14g1233 599 FunFam receptor-like protein kinase FERONIA 481 589 - -
Vvi14g1233 599 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Vvi14g1233 599 FunFam FERONIA receptor-like kinase 41 202 - -
Vvi14g1233 599 SUPERFAMILY Protein kinase-like (PK-like) 482 599 IPR011009 -
Vvi14g1233 599 Pfam Malectin-like domain 44 415 IPR024788 -
Vvi14g1233 599 Gene3D - 40 201 - -
Vvi14g1233 599 Gene3D - 231 416 - -
Vvi14g1233 599 PANTHER OS03G0124300 PROTEIN-RELATED 20 469 IPR046957 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1233 Vvi-Chr14 23763889 23765688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1233 31 599 Receptor kinase-like Gene Family AT3G51550 44.499 4.81e-152 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vvi14g1233 Malectin_like 1.5e-51 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1233 - - vvi:100853107 1223.38