Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1229 ATGTTGCAGAAATCGGATTCTTTATACCTTCCAACTGTTATAGTCAGTCTCTTGCATGGTCAGATGAACCCGAAACAAAGATGCCTCTTTCGCCTCTCAATTCTCACCATTTACTGCTTCTCCTTCTTCTTTCATCATTGGACACTTGTCTCTGCCAGTAACGCCTCCGCCCCTTATCCTCCCACGGATGAAATACTTCTTGATACTGGCTCATCCGGCAACTCCACAGGCGACGATGGGCGACCTTGGAGTGGGGATAATGGCTCGAAATTTGCTCCGTCCCCACAATCTAAAGAAGCTACGTTGGCCGACCCGCGTTCCGCAATTGGTGTCCCCTACTCCACAGCTAGATTCTCTCGTTCCCGTTTCACCTACACTTTCCCTGTCACAGATGGCCCCAAATTCGTAAGACTCTACTTCTACCCAACTTCATATTCAGAGTTAGAAGGGTCAAAGGCCTTGTTTTCTGTCAGCTCAGGCCCATACACCCTCCTTGCCAACTTCAGCGGTTATCTTACAGCAGAGGGGCCAAACAATGCCAGCAGAGAATTCTGCATAAACGTTAAAAAGGAGGATCAAGTATTGCATGTAACCTTCACTCCAAGTTCTTCAAATGACTCCTATGCTTTTGTGAATGGAATTGAAATCTTCTCAATGCCCCTAAACCTCTATTATGCGGCAGAAGATAGGGAAGTCCCATATGTAGGCCAAACAACAAATTATCCGATTGAGAGCAGCACTGCACTTGAGACCGTGTATCGTTTAAACGTTGGGGGTCCCTCCATCAAAGCAACAGATGACTCCGGTTTGTTTAGGGTCTGGTCTATTGATGATGACTATGTGAAGGGTGAGAGTGCTCCCAATTTGTCCCCCCCAGGTGTTAGAATCAAATACACACAAGATACACCTGCCTATGTTGCACCTCAAGAAGTCTACCTAACGTCCCGGTCACTGGGTCGTAACCGAGTGAGAAATAGGCAGAACAATCTCACATGGATATTACCTGTTGATTTGGGATTCATGTATCTGGTCAGGCTCCATTTCTGCGAAACCAATCCGAAAATCGTAGATGTGAGTGATAGGCAATTCACTATTTATATAGATCGTCAGATGGTCGACAATGCTTTTGATGTGATTGCCTTGAGCAAAGGTAACAGCATTCCAGTGTTCAAAGACTATGCTGTGAGGATTGAATCTACTGGAAGCAAATGTAAGTACAATCTCCCCATAGATCTGGGCACTAGGCCTGGGAAAAGTAAGTATGTTGATGCGGTCTTAAATGGGATTGAAATATTTAAATTGAGCAAGACTGATGGCACTCTGGCTGGACAGAACCCTGAACCTCCAAATACTCAACCTTCCCTGACAGTCACCAAGAAGTCTACAAATAAGAAAACAAAGTTTATTGCCATTGGTGCGGCTGTCATGGTGGGTTTAGTATTGCTTTCACTACTACTTTACATCATTTTCCGGCCACGAAGGAAGACCAGGTACTATAATTCTTATAGTAGAAAATCTTGGTGGTTGTGGTATTGGTGTTGGGGCCAAGGCAAATCAAAGTCTTCCCGAACCAAAGCCTCGTCACTGCCAGAGGAACTTTGCCTTCAGTTTCCACTGGCCGAGATCAAAGAAGCCACCAATAACTTCCATGAAAGTTGCATCATCGGCAAGGGAGGATTTGGCAATGTCTACAAAGGTAATATCAGTGATCTGGACAATGCCGTAGCAATCAAACGCTTAAATCCCATGTCAAGGCAGGGAGCCCATGAGTTCAAAACGGAGATAGAGATGCTTTCTAGTCTCCGCCACGGCCACCTCGTCTCCCTGATCGGCTACTGCAATGAAGGACGTGAAATGATCCTCGTGTATGAATTCATGAACAAGGGGACCCTCGGTGACCATCTCTATGAAACTAACAACGACCCTCTACGTTGGAGGCAAAGGCTCAAAATCTGCATTGATGCAGCCCGTGGACTGGACTATCTTCACACAGGCGCACCACAGAAGGTGATTCACCGCGACGTGAAGACCACCAACATTCTCTTGGATGACAAATGGATAGCTAAGGTTTCGGACTTCGGATTGTCCAAAATTGGACCAACTAGCATGCCCGTGGAAACGATGGTTAAGGGCACCATGGGCTACTTGGATCCGGAATACTACAGGCGTCAACAACTAACAGAGAAATGTGATGTCTACTCATTTGGTGTGGTTTTGCTAGAAGTACTGTGTGCTCGAAAACCACTGAATCCAAGACTTGGCAAGGATGAAGCCAATCTAGCTCACTGGGCCAAATTCTGCATCCAGAAGGGGACATTTGATCAGATAATTGATCCCTATCTTATAGGCAAGATATCACCCGCGTGCTTGAAGAAATTCGTGGAGATTGCTATGAGCTGCGTGCAAGATCAGGGAACCGATAGGCCAACGATGGCAGATGTGGTTGACAATCTTGAGTTCGCATTGAGGCTTCAGGAGAGTGCAGAAATAGCGGAGGGTACTATTGTTGATCCTGTCGTCCTCTACAGGGACGTATCCTTCAGATCAGCAATCACAGGCACTTCCAACGACCTTGACAGTGGAGTTGCGGCAGATTCAAGCACCAGTGGCTGTACCGGAACCGGAACTACAACGTCTGACTGTACGACATCTAAGGCCACCAATTCCTCTGGCGTATGA 2679 0.4655 MLQKSDSLYLPTVIVSLLHGQMNPKQRCLFRLSILTIYCFSFFFHHWTLVSASNASAPYPPTDEILLDTGSSGNSTGDDGRPWSGDNGSKFAPSPQSKEATLADPRSAIGVPYSTARFSRSRFTYTFPVTDGPKFVRLYFYPTSYSELEGSKALFSVSSGPYTLLANFSGYLTAEGPNNASREFCINVKKEDQVLHVTFTPSSSNDSYAFVNGIEIFSMPLNLYYAAEDREVPYVGQTTNYPIESSTALETVYRLNVGGPSIKATDDSGLFRVWSIDDDYVKGESAPNLSPPGVRIKYTQDTPAYVAPQEVYLTSRSLGRNRVRNRQNNLTWILPVDLGFMYLVRLHFCETNPKIVDVSDRQFTIYIDRQMVDNAFDVIALSKGNSIPVFKDYAVRIESTGSKCKYNLPIDLGTRPGKSKYVDAVLNGIEIFKLSKTDGTLAGQNPEPPNTQPSLTVTKKSTNKKTKFIAIGAAVMVGLVLLSLLLYIIFRPRRKTRYYNSYSRKSWWLWYWCWGQGKSKSSRTKASSLPEELCLQFPLAEIKEATNNFHESCIIGKGGFGNVYKGNISDLDNAVAIKRLNPMSRQGAHEFKTEIEMLSSLRHGHLVSLIGYCNEGREMILVYEFMNKGTLGDHLYETNNDPLRWRQRLKICIDAARGLDYLHTGAPQKVIHRDVKTTNILLDDKWIAKVSDFGLSKIGPTSMPVETMVKGTMGYLDPEYYRRQQLTEKCDVYSFGVVLLEVLCARKPLNPRLGKDEANLAHWAKFCIQKGTFDQIIDPYLIGKISPACLKKFVEIAMSCVQDQGTDRPTMADVVDNLEFALRLQESAEIAEGTIVDPVVLYRDVSFRSAITGTSNDLDSGVAADSSTSGCTGTGTTTSDCTTSKATNSSGV* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1229 892 MobiDBLite consensus disorder prediction 67 82 - -
Vvi14g1229 892 CDD STKc_IRAK 555 819 - -
Vvi14g1229 892 PANTHER OS03G0124300 PROTEIN-RELATED 38 505 IPR046957 GO:0004672
Vvi14g1229 892 SUPERFAMILY Protein kinase-like (PK-like) 525 820 IPR011009 -
Vvi14g1229 892 FunFam Receptor-like protein kinase FERONIA 626 837 - -
Vvi14g1229 892 Gene3D Transferase(Phosphotransferase) domain 1 626 835 - -
Vvi14g1229 892 ProSiteProfiles Protein kinase domain profile. 549 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1229 892 MobiDBLite consensus disorder prediction 64 102 - -
Vvi14g1229 892 Pfam Malectin-like domain 67 433 IPR024788 -
Vvi14g1229 892 Gene3D - 65 220 - -
Vvi14g1229 892 Gene3D - 247 436 - -
Vvi14g1229 892 ProSitePatterns Protein kinases ATP-binding region signature. 555 578 IPR017441 GO:0005524
Vvi14g1229 892 Pfam Protein tyrosine and serine/threonine kinase 554 818 IPR001245 GO:0004672|GO:0006468
Vvi14g1229 892 FunFam Receptor-like protein kinase FERONIA 521 625 - -
Vvi14g1229 892 MobiDBLite consensus disorder prediction 858 892 - -
Vvi14g1229 892 SMART serkin_6 549 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1229 892 Gene3D Phosphorylase Kinase; domain 1 513 625 - -
Vvi14g1229 892 FunFam FERONIA receptor-like kinase 64 220 - -
Vvi14g1229 892 FunFam FERONIA receptor-like kinase 247 435 - -
Vvi14g1229 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1229 Vvi-Chr14 23710575 23713253 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1229 48 829 Receptor kinase-like Gene Family AT3G51550 51.609 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vvi14g1229 Malectin_like 1.4e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1229 - - vvi:100249810 1742.24