Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1223 ATGGCTTTGGATTCCCGGCTATGGCAGGGAGACGAGCAATCTAATTTCACATCGGCACCAAAACAACTCCAGAATGCATCGTTTATCTCTGAAGCACGTCAACAAGCCCCCTCTATTGACAGAACTCCCTACATGACTGCTCGGATATTTCGATCACCGTTCACTTACGTATTTGATCCTGTTCCTCCTGGTCCCAAGTTTATTCGCTTGCACTTCTATCCAGTTTTGTACGGAGAATTCGACGGCTCCAAAACCTTCTTCTCTGTCACAGTCAGTACGTACACCTTCCTTAGCAACTTCAGTGCTTCCCTTACTGCTCAATCTCTGGGCTTAGAGGCCTTCTCCAAAGAATTCTGCATCAACTTAGCAGAAGATCAGCTGTTAAATATAACTTTCATTCCATCTTCAGAAACTTCAGATGGTTATGCCTTCATCAACGGTATTGAAATTGTCTCTATGCCAGACTATCTCTACTACAGTGGTAGTGATGATATATGGGTCCCCATCATTGGTCAATCATCAAGTATGCCCATAGATGAAGCCCTTGCCTTGGAGACGGTTTACAGGTTAAACATGGGAGGACAGCACATTTCGCCCATGAACGACACTGGAATGTTCCGGACTTGGTCAGAAGACATTGAATACTTAGGTTACAGAGGCGCAGATCCTGTAAACACCTCCAACCCAATCCAGTACTCTGACAAGTTCCCTAACTATTCGGCTCCAGAGCTAGTTTATCAGACAGCCAGAACTATGGGTCCGTCTAAAACTCTCAACATCCAGATCAATCTAACGTGGACATTACCAACATATTTAGGTTTCAATTATCTTATTAGACTTCACTTCTGTGAGGTCTCATCCCGCATAACAAAGAAGCAAGATAGGGAATTCCATATATTTATCAATCAACAAACGGCTGAGACTGAAGCAGATGTCATTACTTGGAGTGGTGGAAATGGTCGTGCATTGTTCCGAGACTATGTCGTCATTTTGCAGAATGGGAGCCAGGGTATGCACAAGCTGTATATCGATCTCCACCCTAACGCTGACGCCAGAACTGCTTACTCTGATGCCATCCTAAATGGGCTCGAACTTTTCAAGTTGAGCAGCGCCTCAGGCAACCTTGCCGGACCTAACCCGGAGCCAAAAGCTATTACCAACTCTGCTCCCACCAAGCCATCTTCTCATCCAACAGAGTCTCGGCAGAAAAGTAAAAGATCGACAATTGCCATTGCCGGTAGTGTTCTTGGTGGGGTCTTTCTCCTCTCTATGCTAGGTTTTTTTGTCCTCCGGAGACGGAAGACAGCGAAGGAGATCGGCCAAAGTTACCAAACGTCAACGTGCACCACGCTATCTAACACAACAACATCCACCAAGACTAAAGCCTCTTCATTACCGTCAGATTTATGTCGCCGCTTCACCCTTTCGGAGTTAAAGAAGGCGACCAATAATTTTGATATCATCCTCCGCATCGGAGTAGGAGGTTTCGGCAACGTCTACAAAGGATACATCGACGATAAAGCCGCCCCAGTTGCAATCAAACGGTTGAACCCTCAATCAAAACAAGGTGCCCGAGAGTTTCAAACGGAGATAGAGATGCTATCCATGCTTCGCCACATTCATCTAGTGTCTCTTATTGGCTTCTGCAGCGAAGATCACGAGATGATCCTCGTTTATGATTACATGGCCAACGGCACTCTCTGCGATCATCTCTACGGAACAAATCCTCCTTTGCAATGGAAGCAGAGGCTCCAGATTTGCCTTGGCGCAGCACGGGGGTTGCATTATCTTCATACAGGCGCGACCCACATGATCATTCACAGAGACGTGAAGACCACCAATATTCTACTGGATGAAAAATGGGTAGCCAAGGTCTCCGATTTCGGATTGTCCAAGGTGGGTCCCACCGGCATGTCCCGGAACCACGTTAGCACGGTCGTGAAGGGAACTTTGGGGTATTTGGATCCGGAGTATTTCCGACTGCAGCAGTTGACGGAGAAGTCTGACGTGTATTCCTTTGGGGTGGTGCTGTTTGAAGTACTGTGCGCAAGGCCACCGGTGATCAAGTCGGAGGACAATGATCGTGTATCTCTCGCCGTGTGGGGCCCGTGTTGCTTCGAAGAAGGTACCCTTGATCAGATCGTTGATCCACATCTGAAGGGCGAGATTGCTCCGGAGAGCCTGAACAAATTTGGGGAGATTGCAGTGAGTTGCCTGCTTCGTGGTGGAATCGAACGGCCATCAATGAGCGATGTGGTATGGGGCCTCGAGTTTGCATTGCAGCTACAGGAGACCGCGGAGCAGGTGGGAATGGATGGTGGGCATCTGAGTGAGGAAAAGGGCGCAGAAGCTCTGTTACGTTACTCCAACACTGTCAGTGTTGATGAAAGCAGTGGACAATTGTCAGGTTCAAGGAGCAGTGTGTTCACAACGAGCAGTCATTCTGATAATGTGGGCGTTGGTGTGTTCTCACTGGTTAGGAGTCATAGCGGGCGATAA 2499 0.479 MALDSRLWQGDEQSNFTSAPKQLQNASFISEARQQAPSIDRTPYMTARIFRSPFTYVFDPVPPGPKFIRLHFYPVLYGEFDGSKTFFSVTVSTYTFLSNFSASLTAQSLGLEAFSKEFCINLAEDQLLNITFIPSSETSDGYAFINGIEIVSMPDYLYYSGSDDIWVPIIGQSSSMPIDEALALETVYRLNMGGQHISPMNDTGMFRTWSEDIEYLGYRGADPVNTSNPIQYSDKFPNYSAPELVYQTARTMGPSKTLNIQINLTWTLPTYLGFNYLIRLHFCEVSSRITKKQDREFHIFINQQTAETEADVITWSGGNGRALFRDYVVILQNGSQGMHKLYIDLHPNADARTAYSDAILNGLELFKLSSASGNLAGPNPEPKAITNSAPTKPSSHPTESRQKSKRSTIAIAGSVLGGVFLLSMLGFFVLRRRKTAKEIGQSYQTSTCTTLSNTTTSTKTKASSLPSDLCRRFTLSELKKATNNFDIILRIGVGGFGNVYKGYIDDKAAPVAIKRLNPQSKQGAREFQTEIEMLSMLRHIHLVSLIGFCSEDHEMILVYDYMANGTLCDHLYGTNPPLQWKQRLQICLGAARGLHYLHTGATHMIIHRDVKTTNILLDEKWVAKVSDFGLSKVGPTGMSRNHVSTVVKGTLGYLDPEYFRLQQLTEKSDVYSFGVVLFEVLCARPPVIKSEDNDRVSLAVWGPCCFEEGTLDQIVDPHLKGEIAPESLNKFGEIAVSCLLRGGIERPSMSDVVWGLEFALQLQETAEQVGMDGGHLSEEKGAEALLRYSNTVSVDESSGQLSGSRSSVFTTSSHSDNVGVGVFSLVRSHSGR* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1223 832 Gene3D Phosphorylase Kinase; domain 1 444 561 - -
Vvi14g1223 832 Pfam Protein tyrosine and serine/threonine kinase 489 690 IPR001245 GO:0004672|GO:0006468
Vvi14g1223 832 FunFam Receptor-like protein kinase FERONIA 457 561 - -
Vvi14g1223 832 Gene3D Transferase(Phosphotransferase) domain 1 562 775 - -
Vvi14g1223 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Vvi14g1223 832 FunFam FERONIA receptor-like kinase 1 154 - -
Vvi14g1223 832 Pfam Malectin-like domain 29 367 IPR024788 -
Vvi14g1223 832 PANTHER OS03G0124300 PROTEIN-RELATED 4 444 IPR046957 GO:0004672
Vvi14g1223 832 FunFam Receptor-like protein kinase FERONIA 562 777 - -
Vvi14g1223 832 SUPERFAMILY Protein kinase-like (PK-like) 460 758 IPR011009 -
Vvi14g1223 832 MobiDBLite consensus disorder prediction 376 406 - -
Vvi14g1223 832 ProSitePatterns Protein kinases ATP-binding region signature. 491 514 IPR017441 GO:0005524
Vvi14g1223 832 Gene3D - 182 369 - -
Vvi14g1223 832 Gene3D - 1 153 - -
Vvi14g1223 832 SMART serkin_6 485 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1223 832 FunFam FERONIA receptor-like kinase 182 369 - -
Vvi14g1223 832 CDD STKc_IRAK 491 753 - -
Vvi14g1223 832 ProSiteProfiles Protein kinase domain profile. 485 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1223 Vvi-Chr14 23631687 23634185 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1223 4 832 Receptor kinase-like Gene Family AT3G51550 52.497 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vvi14g1223 Malectin_like 1.4e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1223 - - vvi:100241313 1628.61