Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1221 ATGAGTTTGGATCAAATCAATCCCATGCTCACCTTAGCTGTCTATCTTTCTTCCTTCTTTCTTCAATTCCTCATCTCCATGGCCGGGGATGAGTCTCCGCCTTATAGGCCCACTGATAATATTCTCCTCGACTGCGGCTCATCCATCAGCAAAATGTCTCCTGATGGCAGGACTTGGCAAGGTGATCAAGGGTCAAAATTCTCTGGAACTTCTGATGTTCAAAACTCATCCTCATCATCCAACGCTTTCCGGCAAGACCCCTCGGTCGAGCAAGTTCCATACATGACCGCTCGTATCTTTAACTCCTCGTTCACATACAGCTTCCCTGTGTCATCCGGACCCAAGTTTGTCCGCTTCTACTTCTACCCAACTGCGTACTCTGGCCATAATGAATCCGAGTTCTTCTTCTCCGTCACATCAGGGGTGTACACCCTCCTAAGCAACTTCAGCGCTTCTCTTACAGTTGCTCCTATGGGGTCCGGAGTATCTTCCCTTGTTAAAGAATTTTCCATCAACGTGTGGGACAACCAAATACTCAATATAACCTTCTCTCCATCCCCAAACTCCTGGGCCTTCGTTAATGGTATTGAAGTCGTTTCCATGCCAAATCATCTCTACGGACAAATTGACCTTAAATTGGTTTCCGCGGTTCAGCAATTTGAAATGGATAACTACACAGCCCTTGAAACTGTTTATCGTTTAAATGTTGGTGGCAATCATATCCCGGCGGAAGCAGACAGTGGCATGTTTCGGTCATGGAGTCAGGATGACTCTTACATATACGGAGGAAATTTGGGGTTGACACCTAACCTGGATAGCCTCATACAATACACTCAGACGACACCGCCTTACATTGCACCACGTACAGTCTACACCACTTCACGCACCATGACTAAACAAGAGGAGATAAATAAGAGAACCAACTTGACGTGGCTCTTCCATGTGGATTCTGGGTTTTATTATCTTGTTAGGCTTCATTTCTGCGAGTTGCAATTGGAGGTAACCCGTCCAGGTGAACGAGTTTTTTCTATATTTCTTAACAATCAGACAGCTGAAGAAGAAATGGACGTCATCGTTAGGAGTGGTGGCACAGGATATCCAATTTATCAAGATTATGTTGTTTATTTGTTATCCGATGGCAGCCGAAGGAAGCAGGAGCTGTGGCTCGATTTACATCCTAATGCGGATAGCAAGTATGCTAACGTAATATTAAATGGATTAGAGATGTTCAAGTTAAATAATTACAGCGGTNAACTCCCCGGAAAGCCCAACAATAGGGCGCCACTGGTGCTGATAACAGTCATTGTAGCTGCGGTCGGCGGAGTAGTCGCACTCTCTCTTCTCTGGTTCTTGGTTCTCCGACCGCGGATGAGAGTGAAACACGTTGGTGGCATCAGTCGGGCAAAGTCATCTTGGGTCCCATTTTCCTACACGACAAGATCCACAACCACCAACGGCTCGTCACTACCGGCCGATATCTGCCGCCACTTCTCCCTTGCCCAGATTAAAGACGCCACATGCAACTTCAACAAGAACTTCATCATCGGCGAGGGAGGTTTCGGAAACGTTTACAAAGGCTTCATCAAAGGCGGCTCCACCACGGTTGCGGTTAAACGGCTGAATCCATCATCAAAACAAGGTGCCCGCGAATTCGAAACAGAGATCAGAATGCTGTCCAAGCTCCGCCACATCCATCTCGTGTCTCTGATCGGTTACTGTGATGAAGAAGGAGAGATGATCCTTGTCTACGATTACATGGCTCGTGGCACTCTCCGTGATCATCTTTATAAAACAAAAAACCCTCCACTCCCATGGAAGCAACGCCTTCAAGTCTGCATTGGGGCGGCGCGTGGATTGCACTACCTTCACACAGGCGCGAAGCATACAATCATTCACCGGGACGTCAAATCCACCAATATCCTGTTAGACGAGAAATGGGTGGCCAAGGTTTCGGATTTCGGGTTGTCTAGAGTAGGCCCCACGAGTATGACCCAGACCCACGTCAGCACAGCAGTGAAGGGCAGTTTCGGGTACGTGGATCCAGAGTATTTCCGGTTGCGGCAATTGACGGAGAAGTCTGACGTGTACTCGTTCGGAGTGGTGCTGTTTGAAGTGTTATGCGGAAGGCCGGCGGTGATCCCCGGTGCTCCAAAAGAGCAGGTGAGTGTAGCAGAGTGGGGCCGGAGATCTTATCGGAACGGAGCCCTTGATCGGATCATGGACCAAAATCTGAGGGACGAGGTTGCGCCAGAGTGTTTGAAAAAGTTTGGGGAGATCGCTGATAGCTGCGTGCGTAACGAGGGAATCGAACGGCCACCAATGAGCGATGTGGTGTGGGCCCTTGAGTTTGCACTGCAGCTCCAGGAGACTGCGGAGAGGAACGCCCAAATCAACAGTGGAGATGAGGTGTATATGGGTCGGGTTGGAGTCAAACCGGACGGATCACAACCGAGCTCATCCGCTGTGACACGTGGAGGAGCCACCACTAGTGATAACGATGACCTGTTCTCGGTGTCAAGGTCAAGGAGTACCGTCACATCTGGGGTGAGCACTAGTGGAAAGAGCGTCCCCAGTAATGATCACGACGGTTCGGTGTTCTCTGATATAAATAATCCAAAGGGACGGTGA 2628 0.4909 MSLDQINPMLTLAVYLSSFFLQFLISMAGDESPPYRPTDNILLDCGSSISKMSPDGRTWQGDQGSKFSGTSDVQNSSSSSNAFRQDPSVEQVPYMTARIFNSSFTYSFPVSSGPKFVRFYFYPTAYSGHNESEFFFSVTSGVYTLLSNFSASLTVAPMGSGVSSLVKEFSINVWDNQILNITFSPSPNSWAFVNGIEVVSMPNHLYGQIDLKLVSAVQQFEMDNYTALETVYRLNVGGNHIPAEADSGMFRSWSQDDSYIYGGNLGLTPNLDSLIQYTQTTPPYIAPRTVYTTSRTMTKQEEINKRTNLTWLFHVDSGFYYLVRLHFCELQLEVTRPGERVFSIFLNNQTAEEEMDVIVRSGGTGYPIYQDYVVYLLSDGSRRKQELWLDLHPNADSKYANVILNGLEMFKLNNYSGXLPGKPNNRAPLVLITVIVAAVGGVVALSLLWFLVLRPRMRVKHVGGISRAKSSWVPFSYTTRSTTTNGSSLPADICRHFSLAQIKDATCNFNKNFIIGEGGFGNVYKGFIKGGSTTVAVKRLNPSSKQGAREFETEIRMLSKLRHIHLVSLIGYCDEEGEMILVYDYMARGTLRDHLYKTKNPPLPWKQRLQVCIGAARGLHYLHTGAKHTIIHRDVKSTNILLDEKWVAKVSDFGLSRVGPTSMTQTHVSTAVKGSFGYVDPEYFRLRQLTEKSDVYSFGVVLFEVLCGRPAVIPGAPKEQVSVAEWGRRSYRNGALDRIMDQNLRDEVAPECLKKFGEIADSCVRNEGIERPPMSDVVWALEFALQLQETAERNAQINSGDEVYMGRVGVKPDGSQPSSSAVTRGGATTSDNDDLFSVSRSRSTVTSGVSTSGKSVPSNDHDGSVFSDINNPKGR* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1221 875 MobiDBLite consensus disorder prediction 813 866 - -
Vvi14g1221 875 SUPERFAMILY Protein kinase-like (PK-like) 479 783 IPR011009 -
Vvi14g1221 875 MobiDBLite consensus disorder prediction 53 84 - -
Vvi14g1221 875 Pfam Malectin-like domain 43 411 IPR024788 -
Vvi14g1221 875 FunFam FERONIA receptor-like kinase 40 202 - -
Vvi14g1221 875 ProSitePatterns Protein kinases ATP-binding region signature. 515 538 IPR017441 GO:0005524
Vvi14g1221 875 PANTHER OS03G0124300 PROTEIN-RELATED 15 467 IPR046957 GO:0004672
Vvi14g1221 875 FunFam FERONIA receptor-like kinase 226 413 - -
Vvi14g1221 875 CDD STKc_IRAK 515 782 - -
Vvi14g1221 875 Gene3D - 40 202 - -
Vvi14g1221 875 Gene3D - 226 412 - -
Vvi14g1221 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Vvi14g1221 875 SMART serkin_6 509 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1221 875 Pfam Protein tyrosine and serine/threonine kinase 514 779 IPR001245 GO:0004672|GO:0006468
Vvi14g1221 875 Gene3D Transferase(Phosphotransferase) domain 1 586 805 - -
Vvi14g1221 875 FunFam receptor-like protein kinase FERONIA 474 585 - -
Vvi14g1221 875 Gene3D Phosphorylase Kinase; domain 1 473 585 - -
Vvi14g1221 875 FunFam Receptor-like protein kinase FERONIA 586 803 - -
Vvi14g1221 875 MobiDBLite consensus disorder prediction 804 875 - -
Vvi14g1221 875 ProSiteProfiles Protein kinase domain profile. 509 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1221 Vvi-Chr14 23594103 23596730 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1221 35 875 Receptor kinase-like Gene Family AT3G51550 52.135 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vvi14g1221 Malectin_like 1.6e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1221 - - vvi:100253138 1668.29