Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1218 ATGCAGAATAAATGGGAATTATTACGTCGAATTGAGTTTGGAGGCCTCTTTACGGGGCTTACAATGGGGTTGTACCCAGTCTCTGTTATAAAAACCAGGCTGCAGGTTGCTTCAGGGGATGCTGTTGAGAGAAATGCATTTTCTGTTATCAAAGGCATACTGAGAATGGATGGGATTCCTGGTTTGTACAGAGGGTTTGGCACGGTCATCACTGGTGCAGTTCCTGCCAGGATTATTTTCCTTACAGCTTTAGAGACTTCTAAAGTGGCTGCTTTCAAGATGGTTGAACCATTTAAGCTATCTGAAACTACCCAGGCAGCTGTAGCAAATGGAATTGCTGGCCTGACTTCGGCACTTTTTTCTCAGGCTGTCTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTACAAGGATATTCAGGCCATCAGAAGTATAATGGGGGCCTGGATGTTGCTCGTAAGATTATAAAGTCTGATGGCATTCGGGGGTTATATAGAGGTTTTGGTCTATCTGTTATGACTTATGCACCATCTAGTGCTGTATGGTGGGCAAGTTACGGTTCAAACCAACGATTCATCTGGAGGGTCGTAGGGAATGGCACTGACCTTGAGAAAGAATCTCCTAGCCAGGGGACAATAGTTGCAGTTCAAGCTACTGGAGCAATTATTGCAGGTGTTACAGCATCCTGCATCACAACTCCAATGGACACAATTAAAACTCGCTTACAGGTCTTGGAACATGAAGGTAGAAAAACAACCACAAAACAAGTTGTCAAAAGTTTGATTGCAGATGATGGTTGGAAAGGTTTATACAGAGGGCTGGGTCCAAGGCTTTTCAGCATGTCAGCATGGGGAACCTCAATGATTTTAGCATACGAATATCTGAAACGCTTGTGTGCTAAAGATGGACAAATATGA 921 0.4354 MQNKWELLRRIEFGGLFTGLTMGLYPVSVIKTRLQVASGDAVERNAFSVIKGILRMDGIPGLYRGFGTVITGAVPARIIFLTALETSKVAAFKMVEPFKLSETTQAAVANGIAGLTSALFSQAVFVPIDVVSQKLMVQGYSGHQKYNGGLDVARKIIKSDGIRGLYRGFGLSVMTYAPSSAVWWASYGSNQRFIWRVVGNGTDLEKESPSQGTIVAVQATGAIIAGVTASCITTPMDTIKTRLQVLEHEGRKTTTKQVVKSLIADDGWKGLYRGLGPRLFSMSAWGTSMILAYEYLKRLCAKDGQI* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1218 306 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 14 303 - -
Vvi14g1218 306 Pfam Mitochondrial carrier protein 23 91 IPR018108 -
Vvi14g1218 306 Pfam Mitochondrial carrier protein 107 194 IPR018108 -
Vvi14g1218 306 Pfam Mitochondrial carrier protein 219 302 IPR018108 -
Vvi14g1218 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 90 IPR018108 -
Vvi14g1218 306 Gene3D Mitochondrial carrier domain 14 305 IPR023395 -
Vvi14g1218 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Vvi14g1218 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 193 IPR018108 -
Vvi14g1218 306 FunFam Mitochondrial substrate carrier family protein 11 303 - -
Vvi14g1218 306 SUPERFAMILY Mitochondrial carrier 21 296 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1218 Vvi-Chr14 23553338 23569402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1218 5 301 Chloroplast and Mitochondria Gene Families AT5G15640 73.754 1.86e-162 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1218 K15121 - vvi:100254860 575.089