Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1217 ATGGGGTTTTGTTTGTCACTCATCAGCAGATCCATTTCCAGTTTCTGTGGTTGCACCATTTTGCTTCTTTTTCTGCTTTCTTGCTCCTGCTTTACTTCTACAGAAGCCTATGATGCACTGGATCCCAATGGAAATATCACGATCAAATGGGATATTATGAGCTGGACTCCAGATGGCTATGTTGCTGTTGTCACTATGTACAATTTCCAGCAATATCGTCACATTCAATCGCCAGGATGGTCACTGCAATGGACATGGGCAAAAAAGGAGGTGATATGGAGCATGTTGGGAGGCCAAACTACAGAGCAAGGGGATTGTTCTAGATTTAAGGGAAATGTACCACATTGTTGTAAAAAAGATCCTACTGTTGTGGATCTATTGCCAGGAACTCCCTACAATCAGCAGATTGCAAATTGCTGCAAGGGAGGTGTAGTCAGTTCATGGGTGCAGGATCCTGCCAATGCAGCAAGCTCATTCCAGGTTAGTGTAGGTTCAGCTGGTACCACCAACAAAACAGTTCGAGTTCCTAAGAACTTCACCCTGAAAGCACCAGGGCCTGGCTATACTTGTGGACCTGCGAAGATCGTTAAACCTACTAGATTTGTGACACAAGATGGAAGGAGAGTCACTCAAGCTTTGATGACATGGAATGTTACATGCACGTATTCACAATTCCTGTCTCAGAAAACCCCCACTTGCTGTGTCTCGCTCTCATCTTTCTACAATGACACAATTGTACCCTGCCCAACATGCACCTGTGGTTGCCAGAACAACATTACTCAGCCAGGGAGCTGTGTAGAGGAAGACTCGCCATATTTGGCTTCAGTTGTCTCAGGTTCTGGGAAGAATAGCTATACTCCTCTAGTCCAGTGTACGAAGCATATGTGTCCCATTCGAGTCCATTGGCATGTTAAGCTTAGCTACAAGGAGTATTGGCGAGTGAAGGTCACAATTACGAATTTCAATTACAGGATGAATTATACGCAGTGGAACTTAGTTGTCCAGCACCCCAACTTTGATAATCTGACCCAGATTTTCAGCTTTAACTACAAGTCATTGACACCCTATGCAGCTATAAATGATACTGCCATGCTATGGGGGGTTAAGTTCTACAATGATCTGCTCGTGCAAGCTGGCCCTCTTGGAAATGTACAGTCAGAGCTACTCTTTCGGAAGGATAAATCAACTTTCACTTTTGAGAAGGGTTGGGCTTTCCCTCGAAGAATCTATTTCAATGGAGATAATTGTGTCATGCCTCCTCCTGATTCCTATCCGTGGTTGCCAAATGCCACCTCACGGACAAGTACCTCCCTACTTACTCTAATAATGGTTCTCTTGTCAGCCTTGCTATTGTTGAATGCACATGTTTAA 1371 0.4435 MGFCLSLISRSISSFCGCTILLLFLLSCSCFTSTEAYDALDPNGNITIKWDIMSWTPDGYVAVVTMYNFQQYRHIQSPGWSLQWTWAKKEVIWSMLGGQTTEQGDCSRFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVVSSWVQDPANAASSFQVSVGSAGTTNKTVRVPKNFTLKAPGPGYTCGPAKIVKPTRFVTQDGRRVTQALMTWNVTCTYSQFLSQKTPTCCVSLSSFYNDTIVPCPTCTCGCQNNITQPGSCVEEDSPYLASVVSGSGKNSYTPLVQCTKHMCPIRVHWHVKLSYKEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAMLWGVKFYNDLLVQAGPLGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNATSRTSTSLLTLIMVLLSALLLLNAHV* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1217 456 PIRSF COBRA 8 456 IPR006918 GO:0010215|GO:0016020
Vvi14g1217 456 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0016020
Vvi14g1217 456 PANTHER PROTEIN COBRA 25 445 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1217 Vvi-Chr14 23528221 23532534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1217 1 451 COBRA Gene Family AT3G02210 74.779 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1217 - - vvi:100263436 918.302