Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1216 ATGAGATTTGTCATCTCTGCGTTTTTCTTTCTTATGATGTTTTCTTACACAGCTGCATATGATCCCTTGGATCCTAATGGAAACATTACTATCAAATGGGATATCATGTCTTGGACCCCAGATGGCTATGTGGCGGTGGTGACAATGCACAACTTCCAAATGTACCGGCACATCATAAGCCCAGGTTGGACCTTGGGATGGACCTGGGCTAAGAAAGAAGTGATATGGTCCATGGTGGGAGCTCAAACCACTGAACAAGGAGACTGCTCCAAGTTCAAAGGGAACATACCACATTGCTGTAAGAAAACCCCCACAGTGGTAGACTTGCTCCCTGGGGTTCCTTACAACCAACAGTTCTCTAATTGCTGCAAAGGGGGAGTGGTGTCCTCATGGGGCCAAGATCCTGCTGCTTCTGTCTCTGCCTTCCAAGTGAGTGTGGGGCTAGCTGGTACTTCCAACAAGACCGTGAAGCTTCCCAAGAACTTCACATTGCTAGGGCCAGGTCCTGGCTACACCTGTGGGATTGCAAAGATTGTGCCCCCCACCAATTTCCTCACACCTGACCGCCGCCGCAAAACTCAGGCACTTATGACATGGAATGTGACTTGCACTTATTCACAGCTCCGCGCCCGGAAAAATCCAAGTTGCTGTGTCTCCTTCTCTTCTTTCTACAATGAAACAATCACTCCTTGCCCTTCTTGTGCTTGTGGCTGCCAAAACAAAAATAACTGTGTCCAGAGCGATTCCAAACTTCTGAGTATGGTGGGAATAAACACTCCAAGAAAAGATAACGTACCTCTGCTGCAATGCACGCACCACATGTGCCCGGTTCGGGTGCACTGGCATCTGAAGATCAACTATAAGGACTACTGGCGTGTGAAGGTCTCCATAACCAATTTCAACTACAGGCTGAACTACACATTGTGGACCCTTGTTGTTCAGCATCCAAACCTCAACAATGTTACTCAAGTTTTTAGCTTTGATTACAAGCCTCTGGTCCCCTATGAGTCCATAAATGACACAGGTATGTTCTATGGCATGAAATTCTATAATGACCAGCTCATGGAGGCTGGGCCATTTGGTAATGTTCAGTCAGAGGTGCTTTTTCAGAAGGACAACTCTTTCACCTTTAAGCAAGGCTGGGCATTTCCTCGGAAAGTCTACTTCAATGGTGATGAGTGCATGCTGCCCCTACCTGAGACATATCCATTTCTGCCCAACTCTGCTCATCAAAACCTACTTGCTTTCTCAACCTTCATTTCTTCGGTGATTTTCCTGCTGGTCACTGTTTGGTGA 1296 0.4699 MRFVISAFFFLMMFSYTAAYDPLDPNGNITIKWDIMSWTPDGYVAVVTMHNFQMYRHIISPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVSSWGQDPAASVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGIAKIVPPTNFLTPDRRRKTQALMTWNVTCTYSQLRARKNPSCCVSFSSFYNETITPCPSCACGCQNKNNCVQSDSKLLSMVGINTPRKDNVPLLQCTHHMCPVRVHWHLKINYKDYWRVKVSITNFNYRLNYTLWTLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDQLMEAGPFGNVQSEVLFQKDNSFTFKQGWAFPRKVYFNGDECMLPLPETYPFLPNSAHQNLLAFSTFISSVIFLLVTVW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1216 431 PANTHER PROTEIN COBRA 7 423 IPR006918 GO:0010215|GO:0016020
Vvi14g1216 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Vvi14g1216 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1216 Vvi-Chr14 23525474 23527533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1216 1 428 COBRA Gene Family AT3G02210 65.367 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1216 - - vvi:100244586 925.62