Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1212 ATGGATCCAGAGCTCAACAGATACATCCTAATGAATGAAGCAAAAGGCCTGGTTCCTGGCTACCCACAGTCCATGTTAGATATCCTGGGAAAATGCAACATTGCAGCTGTCCATGGCTCCACTCACAAGTACATGAGAGGGGCACTTCTAGCTCTCATTAGCCCCACCATGATAAGAGGCCAGCTTTTACCAAAGATAGATGAGTTCATGAGATCCCATCTGAACAAATGGGATACCAAAATCATCAACATCCAGGAGAAAACCAAAGAGATGGCACTTCTCTCTTCTCTCAAGCAGATTGCCGGTATTGAATCCGGCACAATATCTAAGGAGTTTATGCCAGAGTTTTTCAAGCTGGTGTTGGGAACCATTTCTCTGCCTATTGACCTTCCTGGCACAAATTACCGCCGCGGGTTCCAAGCAAGGAAGAATATTGTTGGCATGTTGAGACAACTCATAGAGGAGAGAAAAGCTTCCCAGGAAACCCACAATGACATGCTTGGTTGCCTAATGAGAACTAATGAAAATCGATATAAACTAAGCGATGAAGAGATAATTGATCTCATAATCACAATTCTGTATTCGGGTTACGAGACTGTTTCCACCACTTCCATGATGGCTGTCAAGTATCTCCATGACCACCCAAGAGTTCTTGATGAACTCAGAAAAGAACATTTGGCAATCAGGGAAAGGAAAAGGCCAGAGGATCCCATTGACTGGAATGACTACAAGTTGATGCGCTTCACCCGAGCTGTGATCTTTGAGACCTCCAGACTGGCTACAATTGTTAATGGGGTTTTGAGGAAAACCACCAAAGACATGGAACTGAATGGATTTGTGATTCCAAAAGGCTGGAGAATATATGTTTATACCAGGGAGATCAACTATGACCCCTTGCTATACCCCGACCCGTTAGCTTTCAACCCTTGGAGATGGCTGGACAAGAGCTTAGAGTCCCAAAACTACTTCCTACTATTTGGAGGAGGCACCAGGCAGTGTCCCGGAAAGGAACTGGGAATAGCTGAAATTTCTACATTCCTTCACTACTTTGTAACAAGATACAGATGGGAAGAAGTTGGGGGAGATAAGCTAATGAAGTTTCCAAGAGTTGAAGCACCAAATGGACTACACATTAGGGTCTCAGCTTACTGA 1152 0.4427 MDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLALISPTMIRGQLLPKIDEFMRSHLNKWDTKIINIQEKTKEMALLSSLKQIAGIESGTISKEFMPEFFKLVLGTISLPIDLPGTNYRRGFQARKNIVGMLRQLIEERKASQETHNDMLGCLMRTNENRYKLSDEEIIDLIITILYSGYETVSTTSMMAVKYLHDHPRVLDELRKEHLAIRERKRPEDPIDWNDYKLMRFTRAVIFETSRLATIVNGVLRKTTKDMELNGFVIPKGWRIYVYTREINYDPLLYPDPLAFNPWRWLDKSLESQNYFLLFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVEAPNGLHIRVSAY* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1212 383 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 326 335 IPR017972 GO:0005506|GO:0016705
Vvi14g1212 383 PRINTS E-class P450 group I signature 184 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 PRINTS E-class P450 group I signature 333 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 PRINTS E-class P450 group I signature 290 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 PRINTS E-class P450 group I signature 323 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 PRINTS E-class P450 group I signature 250 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 Gene3D Cytochrome P450 1 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 PANTHER CYTOCHROME P450 26 2 361 - -
Vvi14g1212 383 SUPERFAMILY Cytochrome P450 1 368 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 FunFam Cytochrome P450 85A1 1 382 - -
Vvi14g1212 383 CDD CYP90-like 1 382 - -
Vvi14g1212 383 PRINTS P450 superfamily signature 195 212 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 PRINTS P450 superfamily signature 251 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 PRINTS P450 superfamily signature 324 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1212 383 Pfam Cytochrome P450 126 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1212 Vvi-Chr14 23435565 23437601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1212 1 383 Cytochrome P450 AT5G38970 70.312 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1212 K09590 - vvi:100232983 773.852