Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1198 ATGGATTCCGACTCCCTGGAACTCAGCTTGGGCACTGAAAAACAATGCTATATCCCTCCAAGCATCACCCACTTTCTGAATCACCTTTCCAGGATCAGAGATGTTTCTAAGAGGCTAGCTGAGTTGAACGACTATGTGAGCAAGTTGGAGCAGGAGATGCGCAAGCTGGATGCCTTAAAACGCAATCCTCAACGCTGCATGCTGCTTCTCAAGGATGCTGTTGAGTTTCTGAAAAAGGAAGGAGAGAAGATGAAGCGAGATATAGAATTTAAAGAACCTAAATGGCCTGTGCTGAAGGAGTTTCTGCCATTAAAGAGAAGCTTTAATGAGGAGGAACACAGGGCAGTACCCATGGAGAAAGAATATGGCAGAGAAGAGGAGAACCTGACGATGAATTGTCACTATGAAAAGAGACATAAATCCACCCTTGCAATTCCCAAGCCCTGCAAATTGAGCATAGGAGGAGGAGGAGGAGCATTCACACCATTCAAGGCAACAATGGCGAAAACAGAAGTGGCCAAGGAGGTGGCGGAAGAGCCAGTTTTATCCCTTCTTCTGCCTGGAACCCAGAATTCAAGGCCCCGACTGGGTAACAACCATCTTCTTCCAGAGCCCTACAACAACGCTGCCGATGGAACCCAGACTGAAAGGCTTGAACTGGGTTACAACTACCCTGTTCCCAAGAACAATGACATAGGCAAAGGTGTTGCCCATCATCAGCCGTTTAATCCACAGGCAGTGCAACAACACCAGGCAATCTGGAAGAACAACAGAAGATGCTGGTCACCAGAGCTGCATGCTAGATTCATGGCCGCCATGGACTTTCTTGGTGGTCCTGAAGGGGGCAACAAGTGGAAGATACAGAGCCAGCAAATCGACAAGCAAGTTTCCAAGAGCCATGGAAACCTGAGAGCCACTCCGGAAACTCCTGGAGCACATGGAGTTAGTCCAACTTCCCAGTTGTCCACTAAGCTTAGCGGTGCTGGGACTACTTGGAAGGCCTCTGCTGCTGACAATGCCAATAGGGTCGAAAACGAGCTATGGCCTCAGAAGCCAGTTTTGCAAATCTGGGGACACTGA 1080 0.488 MDSDSLELSLGTEKQCYIPPSITHFLNHLSRIRDVSKRLAELNDYVSKLEQEMRKLDALKRNPQRCMLLLKDAVEFLKKEGEKMKRDIEFKEPKWPVLKEFLPLKRSFNEEEHRAVPMEKEYGREEENLTMNCHYEKRHKSTLAIPKPCKLSIGGGGGAFTPFKATMAKTEVAKEVAEEPVLSLLLPGTQNSRPRLGNNHLLPEPYNNAADGTQTERLELGYNYPVPKNNDIGKGVAHHQPFNPQAVQQHQAIWKNNRRCWSPELHARFMAAMDFLGGPEGGNKWKIQSQQIDKQVSKSHGNLRATPETPGAHGVSPTSQLSTKLSGAGTTWKASAADNANRVENELWPQKPVLQIWGH* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1198 359 Coils Coil 32 62 - -
Vvi14g1198 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 280 IPR044787 GO:0003700|GO:0006355
Vvi14g1198 359 MobiDBLite consensus disorder prediction 297 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1198 Vvi-Chr14 23221847 23224048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1198 18 83 G2-like Transcription Factor Family AT4G37180 43.939 5.10e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1198 - - vvi:104881620 572.778