Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1174 ATGACGATTGAAAGCATTGCACCGGTGAAGGAGAAGTCACGAAAGAACAAAAGGGTAGTTGTTGATGAGAAGGCCCCTTTATTACCTAGTAAACATGAGGAAGAAGGTGGGTTTGAGGAGTTTAATGGGGCTTCATTCACTGGAGCCGTGTTTAATTTATCAACAACAATTGTTGGTGCTGGAATCATGGCTTTGCCTGCAACCATGAAAGTGATGGGTCTTGGTGTTGGAATTGCTATGATTATCTTTATGGCATTCTTAACGGAGGCTTCAATTGAGATGTTGCTTAGATTTAGTCGGGCAGGAAAGTCATCTTCTTATGGAGGTCTTATGGGAGATGCCTTTGGAAAATATGGGAAGATGTTGTTGCAGATATCTGTTATGGTTAACAACATCGGTGTACTTATTGTATATATGATTATTATTGGTGATGTGCTTTCTGGAACATCTTCAACTGAAGTTCATCATGCTGGTGTGCTGGAAGGGTGGTTTGGAGTACACTGGTGGAATGGGCGAACCTTTGTTCTTCTTGTCACAACCCTTGCTGTGTTTTCTCCATTAGCATGCTTTAAGCGCATTGATTCATTGAGTTTCACTTCTGGTTTGTCTGTTGGATTGGCAGTAGCATTTCTTGTTATCACTGTGGGAATCACAGTTATCAAGCTGATTAGTGGAGGCATTTCAATGCCCAGATTGCTTCCTGATGTTACTGATTTGACATCATTTTGGAAACTTTTCACTGTTGTCCCTATTCTTGTCACAGCATACATCTGCCACTACAATGTTCATACAATAGACAATGAACTTGAAGACTCCACACAGATAAAATCTGTTGTGCAAACTTCACTTGCCCTCTGCTCAAGTGTATACATAATGATAAGCTTCTTTGGATTCCTCCTGTTTGGTGATGGAACTCTTGATGATGTGCTTGCTAACTTCGACACTAACCTTGGCATTCCCTATAGCTCCCTGCTGAATGATGCCGTTCGTGTTAGCTATGCTGGTCATCTGATGCTTGTCTTTCCCATTGTCTTCTATCCATTACGGCTTAACTTGGATGGCCTCCTCTTTCCCTCAGCAAGGCCCTTAGTTTTGGACAACTTGAGGTTTGCGTTGATCACTATTGGGCTCATTACTACCATCTTCTTGGGTGCAAATTTCATTCCAAGCATCTGGGATGCTTTCCAGTTCACTGGAGCCACTGCTGCAGTTTGCATTGGCTTTATTTTTCCAGCTGCTATTACACTTAGGGATCGTCACAGCATAGCAACAAAGAAAGACAAGATCTTGGCCAGTTTCATGATTGCTCTTGCCGTGTTCTCAAATCTGGTGGCCATATATAGTGATGCCTATGCTTTGTTCAAGAAGAATTCATCACGGCGTGAATGA 1389 0.4219 MTIESIAPVKEKSRKNKRVVVDEKAPLLPSKHEEEGGFEEFNGASFTGAVFNLSTTIVGAGIMALPATMKVMGLGVGIAMIIFMAFLTEASIEMLLRFSRAGKSSSYGGLMGDAFGKYGKMLLQISVMVNNIGVLIVYMIIIGDVLSGTSSTEVHHAGVLEGWFGVHWWNGRTFVLLVTTLAVFSPLACFKRIDSLSFTSGLSVGLAVAFLVITVGITVIKLISGGISMPRLLPDVTDLTSFWKLFTVVPILVTAYICHYNVHTIDNELEDSTQIKSVVQTSLALCSSVYIMISFFGFLLFGDGTLDDVLANFDTNLGIPYSSLLNDAVRVSYAGHLMLVFPIVFYPLRLNLDGLLFPSARPLVLDNLRFALITIGLITTIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRHSIATKKDKILASFMIALAVFSNLVAIYSDAYALFKKNSSRRE* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1174 462 PANTHER AMINO ACID TRANSPORTER 41 439 - -
Vvi14g1174 462 Pfam Transmembrane amino acid transporter protein 44 448 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1174 Vvi-Chr14 22887409 22891982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1174 3 461 Amino Acid or Auxin Permease AAAP Family AT3G30390 72.331 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1174 K14207 - vvi:100258371 871.692