Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1169 ATGCAGTCTAGTGAGGTCACAGGGCTCCATTATTTTGTCCCTTCCAACCCAACCCCATACCCTGCACATTTCAGCATGGCAGGGAACAACGCCCCCTCAATTCATTTTAGCGGCTTTTCTTCCAGTCCGTTATCCAATTTTCACGTTGTCTCTCCCCAAGTCCATGAGTTCAATCCTCAAATTTCCTGTTTCAGCAGTAACTCCACTTCTGATGAGGCGGATGAGCAACAGCTGAGTCTCATCAATGAGAGGAAGCAGAGGAGGATGATATCTAATAGAGAGTCTGCACGCAGATCGCGTATGCGCAAGCAGAAGCACCTTGATGAGCTCTGGTCACAGGTGGTTTGGCTCAGGAATGAGAATCACCAGCTCATAGATAAGCTAAACCACGTCTCAGAGTGCCACGACCGGGTCCTTCAAGAGAACGTTCAGCTCAAAGAAGAAGCTTCAGAGCTTCGTCAAATGGTCACAGACCTGCAACTCAATAGTCCTTATCCTAATTTGAGAGACCTGGAAGATGAGCCCTCTGAAACACCTTATCTCAGAGATGAATCCTCAAACCCCTCCATCACAAGTTCCATGGAGATGATTCGTTGA 597 0.4774 MQSSEVTGLHYFVPSNPTPYPAHFSMAGNNAPSIHFSGFSSSPLSNFHVVSPQVHEFNPQISCFSSNSTSDEADEQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSECHDRVLQENVQLKEEASELRQMVTDLQLNSPYPNLRDLEDEPSETPYLRDESSNPSITSSMEMIR* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1169 198 MobiDBLite consensus disorder prediction 181 198 - -
Vvi14g1169 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 171 IPR044521 -
Vvi14g1169 198 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Vvi14g1169 198 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Vvi14g1169 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Vvi14g1169 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 133 IPR004827 GO:0003700|GO:0006355
Vvi14g1169 198 FunFam BZIP transcription factor 82 133 - -
Vvi14g1169 198 SUPERFAMILY Leucine zipper domain 84 133 IPR046347 GO:0003700|GO:0006355
Vvi14g1169 198 MobiDBLite consensus disorder prediction 163 198 - -
Vvi14g1169 198 Gene3D - 82 137 - -
Vvi14g1169 198 Coils Coil 135 162 - -
Vvi14g1169 198 Pfam bZIP transcription factor 84 141 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1169 Vvi-Chr14 22839758 22840354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1169 4 170 bZIP Transcription Factor Family AT3G30530 55.814 2.15e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi14g1169 bZIP_1 2.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1169 - - vvi:100265244 402.905