Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1134 ATGGGTTCCATTGAGGAGAAGATAGACCTTGAATCAGATGCGGAGATCCCTTATAGCACATCACAAGGCACAAGAAAAATGGGTTCCATTGAGGAGAAGATAGACCTTGAATCAGATGCGGAGATCCCTTATAGCACATCACAAGGCACAAGAAAAGTTCATTCTTTTGACTTCGAGACATCTCATATTGGGTCTCATGCAGCTCTCTCCACCTCATGGATCTTTAAAAAAATGAGGACTGCTCCTCTAAGAAGTGTTTACATTGTCTTGATTAAAGCGAAGATAAATATGTTGCTACCTTTCGGTCCCTTAGCAATTTTGCTACATTATCTTACTGGAAAGCATGGATGGGTCTTCTTCTTCAGCTTATTAGGTATTACCCCGTTAGCCGAGCGTTTGGGTTTTGCCACCGAGCAGCTTGCATTCTACACAGGTGCTACAGCAAGGGGATATATTATTTTGCTGAAACAAAAGAACTAG 480 0.4188 MGSIEEKIDLESDAEIPYSTSQGTRKMGSIEEKIDLESDAEIPYSTSQGTRKVHSFDFETSHIGSHAALSTSWIFKKMRTAPLRSVYIVLIKAKINMLLPFGPLAILLHYLTGKHGWVFFFSLLGITPLAERLGFATEQLAFYTGATARGYIILLKQKN* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1134 159 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 46 150 IPR004713 GO:0006812|GO:0008324|GO:0016020
Vvi14g1134 159 Coils Coil 155 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1134 Vvi-Chr14 22431591 22456772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1134 22 152 Antiporters AT1G55730 46.565 4.05e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1134 K07300 - vvi:100852538 264.618