Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1117 ATGTTGAAGTGTCGGCAAAAAACGAGAGACTCTGGGACACTATGCAGGAACCTGAAGAAAAACAAGCCTTGTCCTATTAAGTACTGCCAGAGATGTCTCTTAAACAGATATGGAGAGAAAGCCGAAGAGGTGGCACAGTTGGAGGATTGGAAGTGCCCTAAGTGCAGAGGCATTTGCAATTGCAGTTTTTGCAGGAAGAAAATAGGTTGTGCACCTACTGGTATTCTGGTGCACAAAGCCAAGGCAACCGGATTTTCTTCTGTTTCAGAAATGCTGCAAGTTATGGATCCTGACAATAGTGTTAAGAATGTAAAGGAAATGGTTGCTTATCCAAGAAAGCCTGCTACCCCAAGCAAGGAGTCTGTGGTTGTTTCCCCTAGAAAGCTAGGGAAGGAAAACTCATTTGATGGAAAGGATGATCCAAACTTGCATCTGGAGGATTTAACACTAAGCCCTGATGAGAAGAAACCGAAAAAAACAACTAGCGAAGAATTAAAGGAGCATGATCACAATGTCGATAATGGTAGTTGTTTAAAGAAGAGTAACCTAAAAGGGCTGTGTATCACCAACGAATTATCTAATAATGAAGCAAAACCAGAACAAGAGGATGGTGATATCCTGCAAGAGAAGAGTTCTGAGACAGGATCATCTCAGAAAGTGTCTTCTGATTCCATTGAAATAGGAGAAAACAGAGAAGGAGATGGCACAATTTGCCAAAATATGGGAGGTTTAGATAATGCAGGAGCCAAGCGCTATAAAGTTGTCAAATCGCATACAGTTAAGAACACTTTGAAATTTCAGAACAGAGCATTTGTTGTTGATGTTCCATTGCCTCAGGGCACCAAGTTAACTACTGTAACTGGCATTGAGTTGCCTCCTGAAGATGTTGGGGATGCACTGCAATTCTTAGAATTCTGTGCAGCTTTTGGAAAGGCTTTTGATCTCAGAAAAGGGCAGTCAGAATCTATAATGCAAGAATTGATAAGTGGCTGTAGCAAGCACCGTGGACAACAATCGTTAGGTGTTCGATTTCATATCAAATTGCTGTCTCTGATACTAAAAGATTTAGGACAAGACTCTCGACCCTTAAGTTCTGCAAATGGGAAAAATTCATGGTTGGTAGCTCTAGGGCAATGTGTCTCCAAATCCCAGTGTGCTTCGAAAGAACTGCCCTCAGACTGTTTTGATAGGGGTAGTGATGGATATGACGAGTTGGACTTTTCAAAAAAGATCAGACTCCTCAATTTTCTATGTGATGAAGTTCTTTGCACTGAAAAATTGAGGAGTTGGACTGACCGTCAAAATTCAAAATTTGTTGAAAGAGTAAAGGAAGCAAAAGAAAAGGTTCTTGCTGCAAAGGACAAGAAGAAGCTCATGAAGCAGAAGTTGCAAGATGAGACAGCCAAAGCCATCATTGCACAAAATAGTGCTCCTATCTTGATTTCAGAGCATGAACCTACTGTTTCCAAAATAAAAACTGAAGTTGCACAAGCCCATGCGGAGATGCTGGAGGCAATAAGCATGGTACCCAAGAGAAAACAAAGGTCTGATGCTGTTAGAACAGAACCTCTGCTTTTGGATGTTAATGGTCATTCATTTTGGAGATTAAATGGCTATTCTGGTGAACCAGATATTTTGCTTCAAGATATGGGAACAACGGATGAAGGCATCCATGATGAAAAATGGTTTTCCTATGAGCTTGGACAGAAAAAATCGGTTGAAGAGTATATTTCTTTTAGGGAGAAGAAGCTTAGGCTTCACACAGTTACTGAAAAGCTTCCCCTAGAAAGTGCGAAGGAAGAGTTTTTGCATGATTCTATGGATGAGCTGCAATGTTCAACTAGTAAAATTGAGACAGCTAATGCTATGAGCTAG 1875 0.4075 MLKCRQKTRDSGTLCRNLKKNKPCPIKYCQRCLLNRYGEKAEEVAQLEDWKCPKCRGICNCSFCRKKIGCAPTGILVHKAKATGFSSVSEMLQVMDPDNSVKNVKEMVAYPRKPATPSKESVVVSPRKLGKENSFDGKDDPNLHLEDLTLSPDEKKPKKTTSEELKEHDHNVDNGSCLKKSNLKGLCITNELSNNEAKPEQEDGDILQEKSSETGSSQKVSSDSIEIGENREGDGTICQNMGGLDNAGAKRYKVVKSHTVKNTLKFQNRAFVVDVPLPQGTKLTTVTGIELPPEDVGDALQFLEFCAAFGKAFDLRKGQSESIMQELISGCSKHRGQQSLGVRFHIKLLSLILKDLGQDSRPLSSANGKNSWLVALGQCVSKSQCASKELPSDCFDRGSDGYDELDFSKKIRLLNFLCDEVLCTEKLRSWTDRQNSKFVERVKEAKEKVLAAKDKKKLMKQKLQDETAKAIIAQNSAPILISEHEPTVSKIKTEVAQAHAEMLEAISMVPKRKQRSDAVRTEPLLLDVNGHSFWRLNGYSGEPDILLQDMGTTDEGIHDEKWFSYELGQKKSVEEYISFREKKLRLHTVTEKLPLESAKEEFLHDSMDELQCSTSKIETANAMS* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1117 624 MobiDBLite consensus disorder prediction 131 175 - -
Vvi14g1117 624 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 3 92 IPR018866 -
Vvi14g1117 624 MobiDBLite consensus disorder prediction 210 224 - -
Vvi14g1117 624 ProSiteProfiles DDT domain profile. 293 358 IPR018501 -
Vvi14g1117 624 MobiDBLite consensus disorder prediction 109 176 - -
Vvi14g1117 624 Coils Coil 442 462 - -
Vvi14g1117 624 SMART testlast3 293 358 IPR018501 -
Vvi14g1117 624 MobiDBLite consensus disorder prediction 194 238 - -
Vvi14g1117 624 PANTHER OS05G0300700 PROTEIN 4 521 IPR040221 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1117 Vvi-Chr14 22232135 22242506 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Vvi14g1117 zf-4CXXC_R1 5.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1117 - - vvi:100265150 1201.42