Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1115 ATGAACCCTAGCACGTCACAGTCTCACACGCCAATTCCTGTTCAAGAAGACTCTCTCTCTCTACTTCCTGTTTCTAAGGTTCTCTCTCTAGATTCAACGATGGCAGTTCCAGTTGTTCGATTCCCCATCATTCGTCTGGTGCGGTTCATCGGAGTTGTGGTCACTGCTTTCGTTCTCACATGGGCGGTTCATTACAGAGGAGGAATGGCGCTCATTTCTGAAAACAAAGATCTTATCTTCAACGTCCACCCTGTTTTAATGGTGATTGGCCTCATACTTCTGAATGGTGAAGCAATGTTAGCATACAAGACAGTTTCAGGAACGAAAAACTACAAAAAGTTGGTTCATCTTAGTTTACAGTTCCTTGCATTCTGTTTGAGCCTTGTTGGTGTGTGGGCTGCTGTGAAATTCCACAATGAGAGAGGCATAGACAACTTCTACAGCCTGCATTCGTGGTTGGGATTAGCATGCCTTTTCCTGTTTGGCATCCAGTGGGCCACTGGATTTGCAACCTTCTGGTACCCAGGTGGGTCGAGAAACAGCAGAGCTAGCCTTCTTCCTTGGCATGTGTTCTTTGCAGTATACATTTATGCCCTTGCCGTTGCTACTGCTACAACCGGGATTTTAGAAAAAGCCACGTTCCTTCAAAGCAATAAGGTGATATCGCGATATTCCATGGAGGCACTGTTAGTAAACTCTTTGGGTATCTTGATAGTCGTTTTGGGTGGTTTTGTCATTCTTGCAGTTGTTACACCCGCGAATGGCAAAGGTGATATCCCTAGAGGATCCATAGAGTAG 798 0.4536 MNPSTSQSHTPIPVQEDSLSLLPVSKVLSLDSTMAVPVVRFPIIRLVRFIGVVVTAFVLTWAVHYRGGMALISENKDLIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNYKKLVHLSLQFLAFCLSLVGVWAAVKFHNERGIDNFYSLHSWLGLACLFLFGIQWATGFATFWYPGGSRNSRASLLPWHVFFAVYIYALAVATATTGILEKATFLQSNKVISRYSMEALLVNSLGILIVVLGGFVILAVVTPANGKGDIPRGSIE* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1115 265 ProSiteProfiles Cytochrome b561 domain profile. 46 250 IPR006593 -
Vvi14g1115 265 CDD Cyt_b561_ACYB-1_like 73 216 - -
Vvi14g1115 265 PANTHER CYTOCHROME B561-RELATED 38 252 IPR043205 GO:0016491
Vvi14g1115 265 Gene3D - 34 261 - -
Vvi14g1115 265 SMART 561_7 82 208 IPR006593 -
Vvi14g1115 265 FunFam Cytochrome b reductase 1 37 258 - -
Vvi14g1115 265 Pfam Eukaryotic cytochrome b561 82 214 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1115 Vvi-Chr14 22200145 22206211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1115 34 259 Chloroplast and Mitochondria Gene Families AT5G38630 72.687 8.52e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1115 K08360 - vvi:100251417 518.464