Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1104 ATGTTAAGCCCAGATGAGACTAAACCTAAGAAAATAAAGAGGGAACAATTGAAGGAGCATGATGGCAACAAAGATGGTGGTGCTTCTTTGAAGAAGAGTAGCTCAAGAAGGCCTTCTAAAAATGAAGTGAAGGCTGATGGGAAGGAGGATGATGTACTACAAGAGAAGGGTTGTGGGGCGTCAGTATCTCAGAAAGTGTCCCTTGATTCAAATGTAATAGGAAAGAAGGGAGAACAAGGAGCCAAGCCCAATAAAGTTGGTGTTTTAGGTAATGCCATAATTGATAATGTGGGAGCCAAGCCTAATAAAGTTGTTAGATCTCACAAAGTTAAGAAGCATAGAATGAAATTACGAAGGAAAGAATTTGATGTCGATGTTCCGGTGTCCCATGATTCCAATGTAACAGGAGAGAAGGGGGAAGAAGGAGATTGCACCACCTCCCAAAACATGGGTGTTTTAGATAGTGCCATAATTGATAATGTTGGAGCCAAGCCCAATGAAGTTGTCAGATCTCATAAAGTCAAGAAGCATAGAATGAAATTTCAGAAGAAAGAATTTGATGTTGATGTTTCAATGTCTTGTGATTCCAATGTAATAGGAGATAAGGGGGAAGATGGAGATTGCAAAACCTGCCAAAATGTGGGTGTTTTAGATAATGCCATAATTGATAATGCAGGAGCCAAGCCCAATAACAAGGTCAGGAAGCATAGCATGAAATTTCAGCTGAAAGAATTTGATGTTGATGTTCCCTTGCCTCAAGGCATCAGCCTAACCACTATAGCTGGGATTGAATTGTCTCCTGAAGATGTTGGGCATGCATTGCAATTTTTAGAATTCTGTGCAGCATTTGGAAAGGTTTTTGGTCTCAGGAAAGGGCAATCAGAATCTGTATTACAAGAATTGGTACATGGCTATAATGGGCCCCAAGGGCGACACTCTCTAACTGCTCAACTTCATATCAAATTGCTGTCTCTGATACTAAAGGACTTGGGACAACAGTATGCATATTCACCCTAG 1017 0.4061 MLSPDETKPKKIKREQLKEHDGNKDGGASLKKSSSRRPSKNEVKADGKEDDVLQEKGCGASVSQKVSLDSNVIGKKGEQGAKPNKVGVLGNAIIDNVGAKPNKVVRSHKVKKHRMKLRRKEFDVDVPVSHDSNVTGEKGEEGDCTTSQNMGVLDSAIIDNVGAKPNEVVRSHKVKKHRMKFQKKEFDVDVSMSCDSNVIGDKGEDGDCKTCQNVGVLDNAIIDNAGAKPNNKVRKHSMKFQLKEFDVDVPLPQGISLTTIAGIELSPEDVGHALQFLEFCAAFGKVFGLRKGQSESVLQELVHGYNGPQGRHSLTAQLHIKLLSLILKDLGQQYAYSP* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1104 338 ProSiteProfiles DDT domain profile. 267 332 IPR018501 -
Vvi14g1104 338 MobiDBLite consensus disorder prediction 1 55 - -
Vvi14g1104 338 Pfam DDT domain 268 329 IPR018501 -
Vvi14g1104 338 SMART testlast3 267 332 IPR018501 -
Vvi14g1104 338 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1104 Vvi-Chr14 21946416 21948740 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Vvi14g1104 DDT 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1104 - - vvi:100265236 654.055