Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1093 ATGTTGTTGACCGAATCATCTCGGGAGGAAAATGTTTACATGGCCAAGTTGGCTGAACAGGCTGAACGATATGAGGAAATGGTAGAGTTCATGGAAAAAGTTGCAAAGACAGTTGAAGTCGAGGAGCTGACAGTGGAGGAAAGGAACCTCCTCTCTGTTGCTTACAAAAATGTGATTGGGGCTAGGAGGGCTTCATGGAGAATTATCTCGTCCATTGAGCAGAAGGAAGAGAGCAGGGGAAATGAAGATCATGTAGCGATTATTAAGGATTATAGGGCAACAATTGAAGCAGAGCTCAGCAAGATTTGTGATGGGATTCTAAGCCTTCTAGAATCACATCTTATTCCCTCAGCCGTAATTGCTGAGTCTAAGGTGTTTTACCTCAAGATGAAAGGTGATTACCACAGGTACCTAGCTGAATTTAAGACTGGACCTGGTAGGAAAGAGGCTGCAGAGAGCACTTTGTTGGCTTACAAATCTGCTCAGGACATTGCTCTTGCTGAACTAGCTCCTACTCACCCAATAAGGCTGGGGCTTGCTCTTAACTTCTCTGTCTTCTATTATGAAATCCTTAACTCACCAGACCGTGCTTGCAATCTTGCAAAGCAGGCTTTTGATGAGGCTATCTCTGAGCTGGATACGTTAGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAACTTCTCCGAGACAACTTGACTCTGTGGACTTCTGATATCACGGATGATGCTGGAGATGACATCAAGGAAGCATCAAAGCGTGAATCAGGGGAAGGGCAGCCGTGA 789 0.4499 MLLTESSREENVYMAKLAEQAERYEEMVEFMEKVAKTVEVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRATIEAELSKICDGILSLLESHLIPSAVIAESKVFYLKMKGDYHRYLAEFKTGPGRKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDDIKEASKRESGEGQP* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1093 262 Coils Coil 14 41 - -
Vvi14g1093 262 SMART 1433_4 8 251 IPR023410 -
Vvi14g1093 262 FunFam 14-3-3 protein epsilon 3 251 - -
Vvi14g1093 262 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Vvi14g1093 262 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Vvi14g1093 262 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Vvi14g1093 262 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Vvi14g1093 262 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Vvi14g1093 262 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Vvi14g1093 262 PIRSF 14-3-3 3 250 IPR000308 -
Vvi14g1093 262 Gene3D - 2 251 IPR036815 -
Vvi14g1093 262 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Vvi14g1093 262 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Vvi14g1093 262 Pfam 14-3-3 protein 14 238 IPR023410 -
Vvi14g1093 262 MobiDBLite consensus disorder prediction 243 262 - -
Vvi14g1093 262 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Vvi14g1093 262 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1093 Vvi-Chr14 21820886 21823286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1093 6 262 14-3-3 family AT3G02520 88.760 4.93e-170 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1093 K06630 - vvi:100259987 489.96