Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1070 ATGGGCATTTTATTGTTGACTCTGTTAATAGTCTTGGGGACTGTGTTGCTGAGGGCTGCCTACAATACCATCTCCTGTTACTGGCTAACTCCTAGAAGAATCAAGAAAATAATGGAAAATCAAGGAGTGCGTGGCCCCAAACCACGCTTTCTAGTTGGAAACATCATGGACATGGCAGCTCTCGTCTCCAAATCAACCTCCACAGATATGGACTCCATTAGCCATGACACCGTGGGCCGCCTTTTGCCGCATTTCGTGGCCTGGTCCAAGCAATACGGGAAGAGGTTCATATACTGGAATGGGCCAGAGCCACGGATGTGCTTGACGGAGACTGAATTGATCAAAGAGCTGCTGACAAAGTACAACATGATCTCTGGGAAGTCATGGCTGCAGCAGCAGGGGTCGAAGCATTTCATCGGGCGTGGGCTGCTGATGGCGAACGGGGACGACTGGTACCACCAGCGCCACATCGTGGCTCCGGCGTTTATGGGGGACAAGCTGAAGGGGTATGCGGGGTACATGATGGAATGCACTACCCAGATGCTCCAATCACTCCAAAATGCAGTAGAATCTGGGCAGACCGAGTTCGAGATTGGCGAATACATGACTCGTCTCACCGCTGATATCATTTCCAAGACAGAATTTGATAGCAGCTATGAGAAGGGAAAGCAAATATTCCATCTTCTCACTGAGTTGCAAAATCTTTGTGCTCAAGCCAGCAAGCACTTCTGCCTTCCTGGGAGTCGGTATTTTCCTAGTAAATACAACAGAGAGATTAAAGCGCTGAAGACGGAGGTGGAGAGACTGTTGATGGAGATCATACAGAGCCGAAAGGACTGTGTAGAGATTGGCAGGAGCAGTTCTTACGGAAATGATTTACTGGGCTTGCTGCTGAATGAGATGCAGAAGAAGAGAGGGAGTGGGTTCAGCCTAAACCTCCAACTCATCATGGATGAATGCAAAACCTTCTTCTTTGCCGGCCATGAAACCACTGCTCTCCTTCTCACCTGGACCTCCATGCTCCTTGCTAGCAACCCCACTTGGCAAGACAAGGTTCGCGCCCAGGTGGCCGAGGTCTGCAATGGTGAAACTCCCTCTGTTGATCATCTTTCCAAGCTCACCTTGCTAAACATGGTAATCAATGAATCAATGCGGCTGTACCCACCGGCCACCGTCCTACCACGGATGGCCTTCGAAGACATCAAACTAGGGGACCTCCACATCCCAAAGGGACTCTCCATATGGATCCCAGTACTGGCAATCCACCACAGCGAGGAATTATGGGGTAAAGACGCAAATGAGTTCAATCCAGACCGGTTTGCCGGAAAGATGTTCGCCCCAGGTCGCCATTTCATCCCCTTTGCTGCTGGCCCCCGGAATTGCGTTGGCCAGTCCTTTGCCATGATGGAAGCTAAGATCATTCTAGCCATGCTAGTCTCCCGGTTTAGCTTTACAATCTCACAGAATTACCGGCATGCCCCCGTCATCATCCTCACCATAAAGCCCAAATATGGAGTTCAAATCTGTTTGAAGCCCTTGAAACCATGA 1548 0.5006 MGILLLTLLIVLGTVLLRAAYNTISCYWLTPRRIKKIMENQGVRGPKPRFLVGNIMDMAALVSKSTSTDMDSISHDTVGRLLPHFVAWSKQYGKRFIYWNGPEPRMCLTETELIKELLTKYNMISGKSWLQQQGSKHFIGRGLLMANGDDWYHQRHIVAPAFMGDKLKGYAGYMMECTTQMLQSLQNAVESGQTEFEIGEYMTRLTADIISKTEFDSSYEKGKQIFHLLTELQNLCAQASKHFCLPGSRYFPSKYNREIKALKTEVERLLMEIIQSRKDCVEIGRSSSYGNDLLGLLLNEMQKKRGSGFSLNLQLIMDECKTFFFAGHETTALLLTWTSMLLASNPTWQDKVRAQVAEVCNGETPSVDHLSKLTLLNMVINESMRLYPPATVLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGKMFAPGRHFIPFAAGPRNCVGQSFAMMEAKIILAMLVSRFSFTISQNYRHAPVIILTIKPKYGVQICLKPLKP* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1070 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 CDD CYP72_clan 82 507 - -
Vvi14g1070 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 505 - -
Vvi14g1070 515 FunFam Cytochrome P450 734A1 28 514 - -
Vvi14g1070 515 Coils Coil 259 279 - -
Vvi14g1070 515 SUPERFAMILY Cytochrome P450 45 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 Pfam Cytochrome P450 85 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 Gene3D Cytochrome P450 27 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi14g1070 515 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1070 Vvi-Chr14 21269651 21271982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1070 4 374 Cytochrome P450 AT5G38450 69.519 1.11e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1070 K10717 - vvi:100258332 1025.77