Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1055 ATGTACTCTGCAAGCAGGAAAATTCAAAAGGACAAGGGTGCTGAACCCTCTGAATTTGAGGAGACAGTTGCACAGGCATTGTTTGATTTGGAAAATACGGTCCCAGAGCTAAAAAGTGATCTGAAAGACCTTTTCATAAATTCAGCATCTCAAATTGATATTTCAGGAAATCGCAAGGCCATTGTTGTTCATGTTCCCTACAGGTTGAGGAAAGGTTACCGCAAAATTCACCTTAAGCTTGTTAGGGAGCTTGAGAAAAAATTCAGTGGGAAGGAGGTTGTTTTGATTGCCACCCGAAGGATAGTGCGGCCACCAAAGAAAGGTTCTGCCGTTCAGCGACCTCGCTCTCGCACTCTTACATCTGTGCATGAAGCCATGCTTGAGGATATTGTATACCCTGCTGAGATTGTTGGTAAACGTATCAGATACCGATTGGATGGGTCCAAAATTATCAAGATTTTCTTGGATCCCAAGGAGCGGAACAACACCGAGTACAAGCTGGAGACATTTGCCGGAGTTTACAGGAAGCTTTCTGGGAAAGATGTAGTGTTTGAGTATCCGCTTACGGAGGCTTGA 576 0.4427 MYSASRKIQKDKGAEPSEFEETVAQALFDLENTVPELKSDLKDLFINSASQIDISGNRKAIVVHVPYRLRKGYRKIHLKLVRELEKKFSGKEVVLIATRRIVRPPKKGSAVQRPRSRTLTSVHEAMLEDIVYPAEIVGKRIRYRLDGSKIIKIFLDPKERNNTEYKLETFAGVYRKLSGKDVVFEYPLTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1055 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vvi14g1055 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Vvi14g1055 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1055 Vvi-Chr14 21006418 21007857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1055 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 76.963 2.74e-111 313