Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1046 ATGAACGATACTACAGGAAAAGCGGTCTCCTCTTTAGCTATTGCAGAGAAGCGGCCTCAAAGGCCTGGTGGTTGTGTAGGCATTTTCTTTAAGCTCTTCGACTGGAACCGAAGGTTCGCCAAGAAGAAGCTCTTCTCTAAGAAATTGCTCCCCGCAGCTCGTGCAAAACATGCTTCAAAGAAGTTTGGCGATGAGAAGATGCCCATGGCTAAGCATCATCTGAAAAGTGGGAACCGTAATGCAGATACTATGGAGCAAAAGCATGAAATGGGAGCTCCGAGCTTGGTTGCTAGGTTAATGGGTCTTGAATCAATGCCTAGTGTGCAACGAAGTAAGCCCAGGACAGCTTCAATTTCTGAAATTTGTAATGATAGAGAAGAGAAATTTGTGAATAATCATAGTGGGTTTGATAAGGAAGACTTGAATTTGGAGAAAGGAATTACGAAACATGAATCGAGGCCTCAGAAGCTTCAGAAGACAGCTTTAACTGAGAGGCGAGCAGTGGGCAGATTTGGTGCAGAGGCATTGCAATTCAAAACCATCTTGTCACGATCCAAAAAGCATCACCACCACCCAAAGCTTGCTTCTCCTGCAAAGAGTCCAAGGATTTTGTCTGGGAGCCGGACGAATACATCTCGGCTAATTGATGCTGCCACTAAAATTCTGGAACCCAGTTTGCAAGCCACAAATAGAGCCAAATCTGCAATTACTTATTCGAATTCTATCCTACATCCTGTGAAGGGTGAGGTCATGAAGGAGAATACAACAGATCTGTCACTGGATCCGTCAAAACAATTTGGCTATTGTGCCAGTGCGTCCAAGCCTTTGAAGGGACAATCTTCTTGCAAAAATTGTGGTAATTTTCTAGATGTTGTGGATGTAAGATCGAGTGTCGTGGAGCAGGCACCTGTATTTGCTTCATCTACTGCACATTTGGCTAGTGGCCCTTTTCAAGAGTCAGATAGAAGTAATGCAAGACTGCCCATTCCATCATCAATCAAGCCAGAAAGAATTGTGGTTCTCAAGAAAATTCCTGACCAACATGCATCTCTTGCTTCTCAAGCAAATGAAAACATGCAAGCCCGTAGTGAACCATTTAGGGATGGAAAACCTATTTCTGGAGAAGGCAAAGATCAGTGGCATCTGGCCAGCCAACAGTGCAAACCTCAAAAAGATGTGTCATCTCCTGTTGCCTTCAGGCATAGCACTCTAACACAAAATCAAATGTCAATTAGCAGGGACAGAACCCCACCAAGGGCCAAATTAAATGATCTGCAAAGCAGGAGAATTGCATCTCCTGTAAATGCTGTAAGTGGGGCCAAAGACTACATTTCTCTGAACCGAAGTTTGAGTGGCCATACCCGACCAAGAATGGCTATGAAGGTGGATAATAATACCAAGTTTGGCACAGATGGAAATACTTGTTACAGGCAAGATGATTCCTTATCACAACCAAGGACCCCAGTACGGAAGAGGAGGACTATGAACGTTGGTAGGCAAGTAGATAATGCAAGTTTTCTGAATTCTACGTCAGTAAATCAAGGAAATGTGCGATGTAATATGAGCACTAGAAAAGGGTTGCCTAAGAACCAAACCTGTGTCAAGAATGCAGTGGCCAGCCTAAGAGAAAGTGATGGGGCCCATGTCAATAAGGAAATTGATGTTATTAGTTTCACATTTAATTCCCCGATGAGGAACAAAACTGGAATGCTTGCCGAAATGGGAGAGAAAAGAAGGGATCAAAGTGATGTTATCTGTAATAGTACTTCTCGGCCGAGAAAGTTAATATTGGATGAAGATAATGGAAAGAAAGCTTTTCAAAAATCGTTTCCTTTGAGAGTAGATGCTTTAGGTGCCTTTCTTGGAAAAAAATTGAAGGAATTAGCTTCTGCAGAAGAGGATGAGTTGTCAGCTGGAGGTACTCCAACTAAGAGATGCCCTGCTATGATTCTCCAAGAGTTAATATCTGCTTTAACTGAAGAGAAGCCTGTTTCTCAGTATGATGGAGCAGTTAGAATTAACCAGAATGATAATTTGACCTACTGTAACAAGGATCCGTCTGATCACGTATGCTCAAATGGCCACATGTCAAAGAAGAATGTTACTTTCCAGGCCAAAGCAAAGACAGAAGGGACTTCATTTACAGTTTCACATGATGGTGATCATCAAAGCCCAGGATCTGTTCTTGAGGCATCATTCTCGAATGAAAGTTTCTCTAGCAGTCTGGATGATAGTTCAGGACACAAGCTTCACCCTGGATCCATTGATTATTCCTATGATCAGCCAGAGTCATCAGAAGCTGATACAGATCTTTTGGATTCAGCAACCTCGTTGAGCAAATGGAGGACTGGTAGTGAGGCTGTAGCTGATCTTGTCAACTATATTTCTAGCATAGTACATGCCATCAATCTGCCTGGTGCCAGATTAGGTGGAAGCAAACTCACACATGTGAAGGAGGTTATCTTGAATGCTGAACTGTTGTTTGGGAATGCAGCTCTAGCAAATTCAGATGGATGCAGGAGTTTTCTTGGCCACTTTCTAGTTGCCGAACTGGAAACTCTTACCTGTGCTACATGGACAAAGTCAGATATTTTTCCTGGCTTTGAGGATAACACCAAAGGCCGGAATCAAGTTACAGGGTTCCTCTTTGACAGTGTGATAGAATATTTAGACACAAAATACTGCATCCACGCTGATTCAGGATACAAGGCATGGACTAGACTGCCATGGTTGATGAATGGGGAGAAGTTGATCAAGTTAGTTGTTGAGGAGATTAGGAGATGGGCAGATTTAGCTGGGAGGATTCCCGATGAAATAATTGAGTGGGAGATGAGTCACTCTTTGGGAAAATGGACTGATTTTGAGATCGAGGGGTTTGAAACTGGGGCTGAAATTGACAGTGACATACTCCAGATTTTGGTGGATGAAATCGTGGTAGATCTTAAGGAGTGCAGCCTGAATTCCTCATACATCTAA 2976 0.4294 MNDTTGKAVSSLAIAEKRPQRPGGCVGIFFKLFDWNRRFAKKKLFSKKLLPAARAKHASKKFGDEKMPMAKHHLKSGNRNADTMEQKHEMGAPSLVARLMGLESMPSVQRSKPRTASISEICNDREEKFVNNHSGFDKEDLNLEKGITKHESRPQKLQKTALTERRAVGRFGAEALQFKTILSRSKKHHHHPKLASPAKSPRILSGSRTNTSRLIDAATKILEPSLQATNRAKSAITYSNSILHPVKGEVMKENTTDLSLDPSKQFGYCASASKPLKGQSSCKNCGNFLDVVDVRSSVVEQAPVFASSTAHLASGPFQESDRSNARLPIPSSIKPERIVVLKKIPDQHASLASQANENMQARSEPFRDGKPISGEGKDQWHLASQQCKPQKDVSSPVAFRHSTLTQNQMSISRDRTPPRAKLNDLQSRRIASPVNAVSGAKDYISLNRSLSGHTRPRMAMKVDNNTKFGTDGNTCYRQDDSLSQPRTPVRKRRTMNVGRQVDNASFLNSTSVNQGNVRCNMSTRKGLPKNQTCVKNAVASLRESDGAHVNKEIDVISFTFNSPMRNKTGMLAEMGEKRRDQSDVICNSTSRPRKLILDEDNGKKAFQKSFPLRVDALGAFLGKKLKELASAEEDELSAGGTPTKRCPAMILQELISALTEEKPVSQYDGAVRINQNDNLTYCNKDPSDHVCSNGHMSKKNVTFQAKAKTEGTSFTVSHDGDHQSPGSVLEASFSNESFSSSLDDSSGHKLHPGSIDYSYDQPESSEADTDLLDSATSLSKWRTGSEAVADLVNYISSIVHAINLPGARLGGSKLTHVKEVILNAELLFGNAALANSDGCRSFLGHFLVAELETLTCATWTKSDIFPGFEDNTKGRNQVTGFLFDSVIEYLDTKYCIHADSGYKAWTRLPWLMNGEKLIKLVVEEIRRWADLAGRIPDEIIEWEMSHSLGKWTDFEIEGFETGAEIDSDILQILVDEIVVDLKECSLNSSYI* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1046 991 MobiDBLite consensus disorder prediction 401 420 - -
Vvi14g1046 991 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 12 980 - -
Vvi14g1046 991 MobiDBLite consensus disorder prediction 379 396 - -
Vvi14g1046 991 MobiDBLite consensus disorder prediction 184 206 - -
Vvi14g1046 991 Pfam DUF761-associated sequence motif 81 111 IPR032795 -
Vvi14g1046 991 Pfam Domain of unknown function (DUF4378) 814 976 IPR025486 -
Vvi14g1046 991 MobiDBLite consensus disorder prediction 354 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1046 Vvi-Chr14 20794481 20802981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1046 13 981 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 31.000 4.62e-85 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1046 - - vvi:100263470 1923.67