Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1038 ATGTCTGAAAGCTTCCGGGTGTTGAAAATCAATCATGACAATCATATTCTGAGGCTTACTAGGCTAGATTTATATAACGGTACTTGTCCCTCAAGATTCTTGAACACCACCATGAATTACCTGTTTAGTTATTCTCCCCATTTCGGGAACCTCACCCGCTTCTTTGGTTGCTCATCTGCAAGTCCAGCCTTAGCCTCAAATAAATTTAGCTGTCGCAGAAATAATACATCCAGTATTGAAACTGGCTATTTCACGATTGGCTCCATTCCAACTAATGGAAACCTTGGCAATTGTAATGTTAGTATCACTGTTCCCGTGCTTCCATCAGCAGTGTCGGCTATCATAAACAATTCGGCATCTCTGGAACAAGTTTTGAATGATGGATTCGAAGTGCTATGGATTATTGACGACACAGCTTGTTCAGAATGTATGGGATCTGGTGGGCGGTGCGGATACAATACTAGTCATTTCCAACCCATCTGTTTTTGCTCTGATCAACCTTATCTATTGCGGTGTCCAGCCCTACCGGGCACAACTGTACAAGACCACAAGCCTGATGTGGGAATCTTGATTCTTATAGCTGCATTGTTGTTTGGGGTTTGCAGTATTATGGTGGTAGCAGTTTTTATCTGGAGCTTAAGAAGAAAATCTTCATCAAATACTTGGAGAGTCTTTTGGAAGAAAACAAGGAATTCTCAAAATGTAGAGGCTTTTCTAGAAAAATATGCATCCTTGGCTCCTAAAAGATATAGTTATTCAGATGTGAAGAAAATGACTGACTCATTCAGAAATAAATTAGGTCAAGGAGGCTATGGCATTGTGTACAAAGGAAACCTACCTGATGGTCATCTAGTGGTAGTGAAGATCTTGAGTGAGCCCAAAGGCAATGGAGAAGAGTTTATTAATGAGGTTGCCAGCATTAGCAGGACTTCACATGTAAATATTGTAACCCTTCTAGGCTTCTGCTTTGAGGGACACAAAAGAGCTCTCATCTATGAGTTCATGCCCAGTGGATCACTCGAGAAGTACATATATGATGAGAATCAACCAAGGAAAATCCCCCCCTTAGGATGGGAAAAAATCTATCGAATTGCAATTGGCATTGCTCATGGTTTAGAGTACCTACACAGTGGCTGTAATACCCGAATACTCCATCTGGATATCAAACCACAAAACATCCTTCTAGACCAAGATTTCACCCCAAAGATATGTGACTTTGGTCTGGCAAAACTGTGCCCCACCAAAGAGAGCTCCATGTCATTGTTGAGTGCAAGAGGAACAGTGGGGTATGTTGCACCAGAAGTGTTCTCAAGAAACTTTGGAGTAGTCTCCCACAAGTCTGATGTTTATAGTTTTGGAATGATGATTCTAGAAATGGTTGCAGGAAGGAAGATCATTGACACTGGAGCCAGCCGCAGCAGTGAAATATACTTTCCACACTGGATCTATAAGCATCTGGAGCTCGAAGATGATCATCTAAAGCTGCAACATATCTTCAGTGAAGGAGGGGAACCAGTTGCAAGAAAGATGATTTTTGTGGGGTTGTGGTGCATACAGACCAATCCAGCAAATCGACCTTCAATACATAAAGCAGTAGATATGTTAGAAGGTAGTCATGAAGATCTTCAAATCCCACCCAAGCCTTTTCCTTCTTCTCCTGTAAGAACACCACCAGGTACTCCAACCACATCCTCTACCAATCTTTTCCAAAGTAGTGATGAATATACCTCTACTATCACATTGGCATAA 1749 0.4162 MSESFRVLKINHDNHILRLTRLDLYNGTCPSRFLNTTMNYLFSYSPHFGNLTRFFGCSSASPALASNKFSCRRNNTSSIETGYFTIGSIPTNGNLGNCNVSITVPVLPSAVSAIINNSASLEQVLNDGFEVLWIIDDTACSECMGSGGRCGYNTSHFQPICFCSDQPYLLRCPALPGTTVQDHKPDVGILILIAALLFGVCSIMVVAVFIWSLRRKSSSNTWRVFWKKTRNSQNVEAFLEKYASLAPKRYSYSDVKKMTDSFRNKLGQGGYGIVYKGNLPDGHLVVVKILSEPKGNGEEFINEVASISRTSHVNIVTLLGFCFEGHKRALIYEFMPSGSLEKYIYDENQPRKIPPLGWEKIYRIAIGIAHGLEYLHSGCNTRILHLDIKPQNILLDQDFTPKICDFGLAKLCPTKESSMSLLSARGTVGYVAPEVFSRNFGVVSHKSDVYSFGMMILEMVAGRKIIDTGASRSSEIYFPHWIYKHLELEDDHLKLQHIFSEGGEPVARKMIFVGLWCIQTNPANRPSIHKAVDMLEGSHEDLQIPPKPFPSSPVRTPPGTPTTSSTNLFQSSDEYTSTITLA* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1038 582 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Vvi14g1038 582 PANTHER RUST RESISTANCE KINASE LR10-RELATED 225 555 IPR045874 GO:0004672
Vvi14g1038 582 Pfam Protein kinase domain 264 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1038 582 SUPERFAMILY Protein kinase-like (PK-like) 240 536 IPR011009 -
Vvi14g1038 582 ProSiteProfiles Protein kinase domain profile. 260 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1038 582 CDD STKc_IRAK 266 537 - -
Vvi14g1038 582 SMART serkin_6 260 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1038 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 383 395 IPR008271 GO:0004672|GO:0006468
Vvi14g1038 582 MobiDBLite consensus disorder prediction 539 569 - -
Vvi14g1038 582 Pfam Wall-associated receptor kinase C-terminal 72 166 IPR032872 -
Vvi14g1038 582 Gene3D Phosphorylase Kinase; domain 1 233 334 - -
Vvi14g1038 582 Gene3D Transferase(Phosphotransferase) domain 1 335 544 - -
Vvi14g1038 582 FunFam S-receptor-like serine/threonine-protein kinase 227 334 - -
Vvi14g1038 582 FunFam PR5-like receptor kinase 335 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1038 Vvi-Chr14 20629144 20631864 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1038 5 548 Receptor kinase-like Gene Family AT5G38260 41.577 5.05e-139 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vvi14g1038 Pkinase 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1038 - - vvi:100246408 1159.44