Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1037 ATGACCAACTCATTCACATGTAAATTAGGTCAAGGGGGATTTGGTTGTGTGTACCAAGGAAAGCTCCCTGATGGTCGTCAGGTGGCAGTGAAACTCTTGAGTGAGTCAAAGGGTAATGGGGAAGAGTTTATTAATGAAGTTGCTAGCTTCAGTAGAACCTCTCATGTTAATATAGTCACCCTTGTGGGTTTCTGTTTCGAGGGTACTAGAAGAGCTCTGATTTATGAATTCATGCCCAACGGATCTCTCGATAAGCTCATCTACCAGAAAGGATCTCCCAATGCAAACTTGAAGCTGGAATGGAAAACCATGTACCAAATTGCAGTTGGCATTGCTCGAGGACTGGAATACTTATACAGAGGTTGCAACACAAGGATTTTGCATTTTGACATAAAACCTCACAACATTCTTTTAGATGAAGACTTCTGCCCGAAAATTTCTGATTTTGGCCTTGCTAAGCTGTGCCAGAGGAAAGAAAGCATGGTGTCAATGGCGCATGCAAGAGGCACAGCTGGATACATAGCTCCTGAAGTATTCTGTAGAAATTTTGGAGGAGTCTCTCATAAATCTGATGTCTACAGCTATGGAATGTTGGTTTTTGAAATGATTGGAGGAAGAAAGAATATTGATGCGCAAGTGTCTCACACCAGCCAAATATATTTTCCAACTTGGATTTATAAGCAGCTCCAACCAGGCGAGGATCTTATACTCCATAGTATCACCAATGAAGAGGAGGAAGAAACGGCAAGGAAGATGGTTTTAGTAAGTTTGTGGTGCATTCAGCTCAATCCATCAGACCGACCATCAATTGATAAGGTAGTAGAGATGTTGGAAGGAAGCCTTCAATCCTTAGAGATTCCACCAAATCCTTTCATGTTTCCTACTCAAAATGCAACACAAGATCCTTCCACGTCATCTTAG 921 0.418 MTNSFTCKLGQGGFGCVYQGKLPDGRQVAVKLLSESKGNGEEFINEVASFSRTSHVNIVTLVGFCFEGTRRALIYEFMPNGSLDKLIYQKGSPNANLKLEWKTMYQIAVGIARGLEYLYRGCNTRILHFDIKPHNILLDEDFCPKISDFGLAKLCQRKESMVSMAHARGTAGYIAPEVFCRNFGGVSHKSDVYSYGMLVFEMIGGRKNIDAQVSHTSQIYFPTWIYKQLQPGEDLILHSITNEEEEETARKMVLVSLWCIQLNPSDRPSIDKVVEMLEGSLQSLEIPPNPFMFPTQNATQDPSTSS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1037 306 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 296 IPR045874 GO:0004672
Vvi14g1037 306 SUPERFAMILY Protein kinase-like (PK-like) 5 278 IPR011009 -
Vvi14g1037 306 Gene3D Phosphorylase Kinase; domain 1 9 78 - -
Vvi14g1037 306 Pfam Protein kinase domain 8 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1037 306 SMART serkin_6 3 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1037 306 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Vvi14g1037 306 Gene3D Transferase(Phosphotransferase) domain 1 79 286 - -
Vvi14g1037 306 FunFam PR5-like receptor kinase 78 289 - -
Vvi14g1037 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Vvi14g1037 306 ProSiteProfiles Protein kinase domain profile. 3 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1037 306 PIRSF ILK 6 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1037 Vvi-Chr14 20622055 20622975 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1037 1 301 Receptor kinase-like Gene Family AT5G38280 62.295 2.48e-136 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vvi14g1037 Pkinase 7.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1037 - - vvi:100263546 627.476