Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1035 ATGACAGGAGCAAGAGGCACTGTTGGATACATTGCTCCAGAAGTATTCTGTAGAAATTTTGGTGGAGTCTCTCATAAATCCGACGTCTATAGCTACGGAATGTTAGTTCTCGAAATGGTGGGAGGAAGAAAGAACAACATTGATATTCAAGAATCCAATGCCAGTGAAATATATTTTCCTGACTGGATCTATGAGAATCTTGAGCAAGGCAAATGTCAACTACTTCTTCAAGTTACGACCGACGAGGAACAAGAAATAGCAAGGAAGATGATTATAGTGAGTATGTGGTGCATCCAGACCAATCCGTCCAATCGGCCATCAATCAGCAAGGTAGTAGAAATGTTGGAAGGGAACCTTCAGTCCTTGGAAATTCCACCAAAGCCTTTCCTGTTTTCTCCTATGATGTCAGACCAAGATTCTTCCACATAA 429 0.4149 MTGARGTVGYIAPEVFCRNFGGVSHKSDVYSYGMLVLEMVGGRKNNIDIQESNASEIYFPDWIYENLEQGKCQLLLQVTTDEEQEIARKMIIVSMWCIQTNPSNRPSISKVVEMLEGNLQSLEIPPKPFLFSPMMSDQDSST* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1035 142 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
Vvi14g1035 142 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 137 IPR045874 GO:0004672
Vvi14g1035 142 SUPERFAMILY Protein kinase-like (PK-like) 2 135 IPR011009 -
Vvi14g1035 142 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1035 142 Pfam Protein kinase domain 4 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g1035 Vvi-Chr14 20572399 20572827 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g1035 1 133 Receptor kinase-like Gene Family AT5G38280 54.815 1.25e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Vvi14g1035 Pkinase 7.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1035 - - zju:107416083 209.534