Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0994 ATGGAACAAGAAGAACCCAATATAGAGTTTGAGGATCAAAAACCCTCCCTCTCCTCCCCCTCCTCCTCCTCCTCCTCTACCCTGATATCCACAAAGGTTCCCTTACCTGTCACGGTACAACAAGGAACTAGGGGAAACCAAGTTGTGAGAACTAGTAGTAAGAGTGGGAAGGAGGTCAAGGATGGAACAAGAGTGAATGATGGGAAGGGCAGGGCGTATCGGGGAGTACGAATGCGGAATTGGGGCAAATGGGTGTCGGAGATTCGTGAGCCCAAGAAGAATTCAAAAATATGGCTGGGGACTTTTCCCAATGCAGAAATGGCGGCTCTGGCCCATGATGTAGCTTCGCTTAGTCTTAAAGGTCACACAGCTTATCTCAATTTCCCTGAGCTGGCTCAAGGGCTCCCCCGTCCGACCACCGCCTCACCAAAAGATATCAGAGCTGCAGCTGTCAAGGCGGCCACCTTACACTACCCAAGAAGCCATGAACCTCATCAAGCCGCGCTAATGGGTCCATACTCCTCAGGTCCTAGTGTGAGATCTAATATCCTTCAAGAATCATCAACTTCACCAATAACAGAAGATGATGACGCATTTCTTGACCTTCCCGATCTCTTCCCTGAACTACCCGATCCCTTTCTCGATGTCAGCCATTTGGAGCTGGCTGGGACTGAGCCCATCATCACCAGGTTTGATCACCATCACTTTTAA 711 0.4979 MEQEEPNIEFEDQKPSLSSPSSSSSSTLISTKVPLPVTVQQGTRGNQVVRTSSKSGKEVKDGTRVNDGKGRAYRGVRMRNWGKWVSEIREPKKNSKIWLGTFPNAEMAALAHDVASLSLKGHTAYLNFPELAQGLPRPTTASPKDIRAAAVKAATLHYPRSHEPHQAALMGPYSSGPSVRSNILQESSTSPITEDDDAFLDLPDLFPELPDPFLDVSHLELAGTEPIITRFDHHHF* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0994 236 MobiDBLite consensus disorder prediction 1 69 - -
Vvi14g0994 236 FunFam Ethylene-responsive transcription factor 2 71 130 - -
Vvi14g0994 236 ProSiteProfiles AP2/ERF domain profile. 72 129 IPR001471 GO:0003700|GO:0006355
Vvi14g0994 236 MobiDBLite consensus disorder prediction 54 69 - -
Vvi14g0994 236 MobiDBLite consensus disorder prediction 12 53 - -
Vvi14g0994 236 Gene3D AP2/ERF domain 72 130 IPR036955 GO:0003700|GO:0006355
Vvi14g0994 236 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Vvi14g0994 236 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Vvi14g0994 236 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 32 205 - -
Vvi14g0994 236 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Vvi14g0994 236 CDD AP2 73 131 IPR001471 GO:0003700|GO:0006355
Vvi14g0994 236 Pfam AP2 domain 73 122 IPR001471 GO:0003700|GO:0006355
Vvi14g0994 236 SUPERFAMILY DNA-binding domain 72 130 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0994 Vvi-Chr14 19671460 19672170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0994 61 158 AP2-EREBP Transcription Factor Family AT4G32800 63.265 6.06e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vvi14g0994 AP2 6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0994 - - vvi:100249652 433.721